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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82551-82600 / 86044 show all
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.2719
98.7603
99.7888
58.8261
9561294522
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
98.8761
99.2488
98.5061
62.8641
1057810551616
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
66.6667
100.0000
50.0000
95.5556
10111
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.2452
99.2509
99.2395
60.2118
265226122
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
91.6667
88.0000
95.6522
52.0833
2232211
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
65.6716
50.0000
95.6522
50.0000
112211
100.0000
ckim-gatkINDELI1_5HG002complexvarhetalt
92.1829
85.6895
99.7411
68.7184
1479247154144
100.0000
ckim-gatkINDELI1_5HG002compoundhethetalt
95.6413
91.6793
99.9612
55.8202
102479301030844
100.0000
ckim-gatkINDELI1_5HG002compoundhethomalt
73.8739
99.6960
58.6762
88.6290
3281328231231
100.0000
ckim-gatkINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
91.2201
83.9465
99.8737
37.5887
75314479111
100.0000
ckim-gatkINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
95.6971
98.2332
93.2886
69.7769
27852782020
100.0000
ckim-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.2182
92.7585
99.9459
61.2554
5508430554633
100.0000
ckim-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.5071
99.8869
99.1302
72.7419
3533435333131
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.1713
92.6560
99.9638
35.0529
5463433552522
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.0984
99.3619
98.8363
71.4448
37372437374444
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.5149
99.5000
97.5490
60.8445
199119955
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7912
100.0000
99.5833
75.9880
478047822
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8557
100.0000
99.7118
79.2216
346034611
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
89.6552
95.1220
84.7826
76.1039
784781414
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.1468
92.6189
99.9541
23.6736
4304343435722
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.3424
98.7673
95.9581
68.3562
64186412727
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.8132
93.8694
99.9475
22.1609
3782247380922
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.5230
99.2995
97.7586
67.1946
56745671313
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.0708
92.4769
99.9552
27.1601
4413359446622
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.2353
99.2360
97.2546
73.3953
1169911693333
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.1713
92.6560
99.9638
35.0529
5463433552522
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.0984
99.3619
98.8363
71.4448
37372437374444
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.2944
92.8778
99.9719
25.4138
3534271355911
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.5587
100.0000
99.1213
72.8401
564056455
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
76.3320
62.0112
99.2537
24.2938
1116813311
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
93.9805
88.9241
99.6466
70.1162
2813528211
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8968
100.0000
99.7938
64.2989
968096822
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.4398
100.0000
98.8858
68.4996
1065010651212
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
66.6667
100.0000
50.0000
98.4000
10111
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
99.0897
98.4762
99.7110
62.4593
103416103533
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_11to50het
99.6807
99.5745
99.7872
69.5003
468246911
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.6269
100.0000
99.2565
66.2060
267026722
100.0000
ckim-gatkINDELI1_5map_l150_m0_e0homalt
98.5294
100.0000
97.1014
89.4009
6706722
100.0000
ckim-gatkINDELI1_5map_l250_m0_e0homalt
94.7368
100.0000
90.0000
96.9880
90911
100.0000
ckim-gatkINDELI1_5map_l250_m1_e0homalt
97.7778
100.0000
95.6522
94.3696
4404422
100.0000
ckim-gatkINDELI1_5map_l250_m2_e0homalt
97.8261
100.0000
95.7447
95.1696
4504522
100.0000
ckim-gatkINDELI1_5map_l250_m2_e1homalt
97.8723
100.0000
95.8333
95.1759
4604622
100.0000
ckim-gatkINDELI1_5segduphomalt
99.5772
99.5772
99.5772
92.8593
471247122
100.0000
ckim-gatkINDELI6_15HG002complexvarhomalt
98.3779
99.9176
96.8850
55.5556
1213112133939
100.0000
ckim-gatkINDELI6_15HG002compoundhethetalt
95.9864
92.3041
99.9748
28.2337
7880657792122
100.0000
ckim-gatkINDELI6_15func_cds*
97.6744
97.6744
97.6744
41.0959
4214211
100.0000
ckim-gatkINDELI6_15func_cdshomalt
96.7742
100.0000
93.7500
40.7407
1501511
100.0000
ckim-gatkINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.8037
88.4906
99.7955
45.1178
4696148811
100.0000
ckim-gatkINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
92.9134
100.0000
86.7647
76.7123
5905999
100.0000
ckim-gatkINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.7267
93.7500
99.8985
40.2385
2925195295433
100.0000