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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82501-82550 / 86044 show all
cchapple-customINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
84.9390
96.8944
75.6098
24.9084
15651555050
100.0000
cchapple-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
98.6709
98.4962
98.8462
81.0219
262425733
100.0000
cchapple-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.4624
100.0000
98.9305
81.6667
155018522
100.0000
cchapple-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
98.6394
98.6486
98.6301
79.1429
7317211
100.0000
cchapple-customINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.4104
99.5294
99.2916
44.4954
846484166
100.0000
cchapple-customINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.6602
99.7743
99.5465
28.6408
442143922
100.0000
cchapple-customINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
97.5610
100.0000
95.2381
27.5862
2102011
100.0000
cchapple-customINDELD6_15map_l100_m0_e0homalt
93.6170
91.6667
95.6522
86.7816
2222211
100.0000
cchapple-customINDELD6_15map_l100_m1_e0homalt
95.9870
93.7500
98.3333
82.2485
6045911
100.0000
cchapple-customINDELD6_15map_l100_m2_e0homalt
96.0504
93.8462
98.3607
82.7684
6146011
100.0000
cchapple-customINDELD6_15map_l100_m2_e1homalt
94.7024
94.0299
95.3846
82.3848
6346233
100.0000
cchapple-customINDELD6_15map_l125_m0_e0homalt
96.0000
100.0000
92.3077
90.1515
1201211
100.0000
cchapple-customINDELD6_15map_l125_m1_e0homalt
93.9394
91.1765
96.8750
85.4545
3133111
100.0000
cchapple-customINDELD6_15map_l125_m2_e0homalt
94.2857
91.6667
97.0588
85.4701
3333311
100.0000
cchapple-customINDELD6_15map_l125_m2_e1homalt
93.1507
91.8919
94.4444
85.1852
3433422
100.0000
cchapple-customINDELD6_15map_l150_m0_e0homalt
93.3333
100.0000
87.5000
92.5234
70711
100.0000
cchapple-customINDELD6_15map_l150_m1_e0homalt
94.1176
92.3077
96.0000
85.7955
2422411
100.0000
cchapple-customINDELD6_15map_l150_m2_e0homalt
94.5455
92.8571
96.2963
86.2245
2622611
100.0000
cchapple-customINDELD6_15map_l150_m2_e1homalt
93.1034
93.1034
93.1034
85.5721
2722722
100.0000
cchapple-customINDELD6_15segdup*
96.8734
95.8115
97.9592
92.6811
183819244
100.0000
cchapple-customINDELD6_15segduphomalt
96.0000
100.0000
92.3077
90.7308
5004844
100.0000
cchapple-customINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
97.2112
100.0000
94.5736
84.5324
122012277
100.0000
cchapple-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
95.7643
96.2963
95.2381
82.0896
2618044
100.0000
cchapple-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
91.6667
100.0000
84.6154
85.7143
2202244
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
96.4706
100.0000
93.1818
85.4305
4104133
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
94.1271
93.6170
94.6429
77.7778
4435333
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
95.6098
93.3333
98.0000
75.7282
1414911
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
80.0000
100.0000
66.6667
86.9565
40422
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
92.0000
88.4615
95.8333
90.9774
2332311
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
97.8723
100.0000
95.8333
90.5512
302311
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
77.4194
75.0000
80.0000
64.2857
31411
100.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
50.0000
00011
100.0000
cchapple-customINDELI16_PLUSmap_l100_m1_e0homalt
90.9091
100.0000
83.3333
96.2500
50511
100.0000
cchapple-customINDELI16_PLUSmap_l100_m2_e0homalt
90.9091
100.0000
83.3333
96.7033
50511
100.0000
cchapple-customINDELI16_PLUSmap_l100_m2_e1homalt
90.9091
100.0000
83.3333
96.7213
50511
100.0000
cchapple-customINDELI16_PLUSmap_sirenhomalt
95.4545
100.0000
91.3043
92.0690
2102122
100.0000
cchapple-customINDELI1_5HG002compoundhethomalt
69.4826
98.7842
53.5874
88.0589
3254239207207
100.0000
cchapple-customINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
96.3319
98.5866
94.1781
59.8901
27942751717
100.0000
cchapple-customINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.0646
99.1518
98.9776
67.7712
35073034853636
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.1864
99.4416
98.9325
66.4187
37402137074040
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.7494
99.5000
98.0100
56.6810
199119744
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7899
99.7908
99.7890
71.4801
477147311
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
91.1652
96.3415
86.5169
61.6379
793771212
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.5597
98.9214
96.2349
54.4582
64276392525
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.5211
99.2995
97.7547
53.9013
56745661313
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.4351
99.3209
97.5651
66.8707
1170811622929
100.0000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.1864
99.4416
98.9325
66.4187
37402137074040
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
98.6628
98.4043
98.9228
61.2656
555955166
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
79.6460
66.5049
99.2593
44.6721
1376913411
100.0000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
89.4961
81.4815
99.2593
43.5146
22513411
100.0000