PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82301-82350 / 86044 show all
ckim-dragenINDEL**hetalt
95.9597
92.4793
99.7124
57.0557
233391898235756868
100.0000
ckim-dragenINDEL*HG002complexvarhetalt
95.4523
92.7548
98.3114
67.8279
343126836686363
100.0000
ckim-dragenINDEL*HG002compoundhethetalt
96.0007
92.5060
99.7699
50.0702
232931887234175454
100.0000
ckim-dragenINDEL*func_cdshomalt
99.7792
100.0000
99.5595
37.9781
226022611
100.0000
ckim-dragenINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
92.8661
87.0293
99.5422
40.0515
332849634791616
100.0000
ckim-dragenINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.2357
94.9731
99.6087
58.9389
14642775147635858
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.4289
93.4391
99.6164
40.1880
156091096158436161
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.0439
96.5665
99.5671
75.8368
225823011
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.0901
96.9697
99.2366
79.4349
128413011
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.4949
86.3386
99.5964
37.6133
235137224681010
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.1377
92.8872
99.6239
30.9811
12785979129794949
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.9831
94.4710
99.6324
29.8141
10491614105713939
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.1413
92.8877
99.6311
33.7242
13034998132344949
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.4289
93.4391
99.6164
40.1880
156091096158436161
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_diTR_11to50hetalt
96.9002
94.3962
99.5408
32.4909
988858799714646
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_diTR_51to200hetalt
84.5547
73.4026
99.7027
31.1263
919333100633
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.3008
97.1963
99.4307
73.6236
5201552433
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_homopolymer_gt10homalt
93.0233
95.2381
90.9091
99.9650
2012022
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.7395
97.7629
99.7358
42.4788
262260264377
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.5645
99.8024
99.3278
58.3031
60601260584141
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.1924
95.1464
99.3283
34.1625
113758118388
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_triTR_11to50hetalt
99.4570
99.1333
99.7828
28.5493
915891922
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_triTR_11to50homalt
99.7677
99.8606
99.6750
47.8198
21493214777
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_triTR_51to200homalt
96.9072
100.0000
94.0000
55.7522
4704733
100.0000
ckim-dragenINDEL*map_l150_m0_e0homalt
98.1651
98.1707
98.1595
90.6697
161316033
100.0000
ckim-dragenINDEL*map_l250_m0_e0homalt
96.0000
96.0000
96.0000
97.1198
2412411
100.0000
ckim-dragenINDEL*map_l250_m1_e0homalt
96.3303
96.3303
96.3303
94.4557
105410544
100.0000
ckim-dragenINDEL*map_l250_m2_e0homalt
96.5217
96.5217
96.5217
94.9782
111411144
100.0000
ckim-dragenINDEL*map_l250_m2_e1homalt
96.5517
96.5517
96.5517
95.0491
112411244
100.0000
ckim-dragenINDELC1_5**
76.5957
90.0000
66.6667
87.3684
91844
100.0000
ckim-dragenINDELC1_5*hetalt
80.0000
100.0000
66.6667
87.3684
10844
100.0000
ckim-dragenINDELC1_5HG002complexvar*
75.0000
85.7143
66.6667
74.4681
61844
100.0000
ckim-dragenINDELC1_5HG002complexvarhetalt
0.0000
0.0000
66.6667
74.4681
00844
100.0000
ckim-dragenINDELC1_5HG002compoundhet*
84.2105
100.0000
72.7273
75.0000
10833
100.0000
ckim-dragenINDELC1_5HG002compoundhethetalt
84.2105
100.0000
72.7273
75.0000
10833
100.0000
ckim-dragenINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
91.6667
00011
100.0000
ckim-dragenINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
00011
100.0000
ckim-dragenINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
65.1163
66.6667
63.6364
84.7222
21744
100.0000
ckim-dragenINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
63.6364
84.7222
00744
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
62.5000
87.0968
01533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
62.5000
87.0968
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
62.5000
81.3953
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
62.5000
81.3953
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
62.5000
78.3784
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
62.5000
78.3784
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
62.5000
82.2222
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
62.5000
82.2222
00533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
62.5000
87.0968
01533
100.0000
ckim-dragenINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
62.5000
87.0968
00533
100.0000
ckim-dragenINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
85.7143
84.4444
00611
100.0000