PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81901-81950 / 86044 show all
cchapple-customINDEL*segduphomalt
99.5843
99.8958
99.2746
93.0445
959195877
100.0000
anovak-vgINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
70.5882
75.0000
66.6667
99.4646
93633
100.0000
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.0377
70.0000
62.5000
99.5059
73533
100.0000
anovak-vgINDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
52.8000
37.9310
86.8421
99.9569
33543355
100.0000
anovak-vgINDEL*map_l250_m0_e0homalt
64.2857
60.0000
69.2308
98.0168
15101888
100.0000
anovak-vgINDEL*tech_badpromotershet
55.6267
41.0256
86.3636
38.8889
16231933
100.0000
anovak-vgINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
85.7143
96.5000
00611
100.0000
anovak-vgINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
66.6667
91.1765
00211
100.0000
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
94.4444
10111
100.0000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
0.0000
97.1429
10011
100.0000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
57.1429
46.1538
75.0000
33.3333
67622
100.0000
anovak-vgINDELD16_PLUSmap_l100_m0_e0*
52.3810
39.2857
78.5714
92.5532
11171133
100.0000
anovak-vgINDELD16_PLUSmap_l100_m0_e0het
58.0645
47.3684
75.0000
90.6977
910933
100.0000
anovak-vgINDELD16_PLUSmap_l100_m1_e0homalt
62.3377
53.3333
75.0000
92.8571
87622
100.0000
anovak-vgINDELD16_PLUSmap_l100_m2_e0homalt
65.2850
56.2500
77.7778
92.5620
97722
100.0000
anovak-vgINDELD16_PLUSmap_l100_m2_e1homalt
65.2850
56.2500
77.7778
92.7419
97722
100.0000
anovak-vgINDELD16_PLUSmap_l125_m0_e0*
50.0000
41.6667
62.5000
94.2857
57533
100.0000
anovak-vgINDELD16_PLUSmap_l125_m0_e0het
58.8235
55.5556
62.5000
91.8367
54533
100.0000
anovak-vgINDELD16_PLUSmap_l150_m1_e0*
66.6667
53.3333
88.8889
94.7977
87811
100.0000
anovak-vgINDELD16_PLUSmap_l150_m1_e0het
69.5652
57.1429
88.8889
92.3729
86811
100.0000
anovak-vgINDELD16_PLUSmap_l150_m2_e0*
66.6667
52.9412
90.0000
94.4751
98911
100.0000
anovak-vgINDELD16_PLUSmap_l150_m2_e0het
69.2308
56.2500
90.0000
91.9355
97911
100.0000
anovak-vgINDELD16_PLUSmap_l150_m2_e1*
64.2857
50.0000
90.0000
94.5946
99911
100.0000
anovak-vgINDELD16_PLUSmap_l150_m2_e1het
69.2308
56.2500
90.0000
92.1260
97911
100.0000
anovak-vgINDELD16_PLUSmap_l250_m1_e0*
57.1429
50.0000
66.6667
97.2477
22211
100.0000
anovak-vgINDELD16_PLUSmap_l250_m1_e0het
66.6667
66.6667
66.6667
96.0526
21211
100.0000
anovak-vgINDELD16_PLUSmap_l250_m2_e0*
66.6667
60.0000
75.0000
96.5217
32311
100.0000
anovak-vgINDELD16_PLUSmap_l250_m2_e0het
66.6667
66.6667
66.6667
96.2500
21211
100.0000
anovak-vgINDELD16_PLUSmap_l250_m2_e1*
66.6667
60.0000
75.0000
96.6387
32311
100.0000
anovak-vgINDELD16_PLUSmap_l250_m2_e1het
66.6667
66.6667
66.6667
96.3415
21211
100.0000
anovak-vgINDELD16_PLUSmap_sirenhomalt
59.9144
44.1176
93.3333
91.0180
15191411
100.0000
anovak-vgINDELD16_PLUStech_badpromoters*
33.3333
25.0000
50.0000
50.0000
13111
100.0000
anovak-vgINDELD16_PLUStech_badpromotershomalt
0.0000
0.0000
66.6667
00011
100.0000
anovak-vgINDELD1_5func_cdshomalt
94.3662
90.5405
98.5294
29.8969
6776711
100.0000
anovak-vgINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
65.1163
63.6364
66.6667
99.3328
74633
100.0000
anovak-vgINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
70.1754
62.5000
80.0000
99.4253
53411
100.0000
anovak-vgINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
66.6667
100.0000
50.0000
99.1649
20222
100.0000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
63.1579
60.0000
66.6667
99.3066
64633
100.0000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
57.1429
80.0000
99.3990
43411
100.0000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
100.0000
50.0000
99.1416
20222
100.0000
anovak-vgINDELD1_5map_l250_m0_e0homalt
52.6316
38.4615
83.3333
98.9111
58511
100.0000
anovak-vgINDELD1_5map_l250_m1_e0homalt
73.0707
59.6491
94.2857
96.1957
34233322
100.0000
anovak-vgINDELD1_5map_l250_m2_e0homalt
74.7056
61.6667
94.7368
96.3844
37233622
100.0000
anovak-vgINDELD1_5map_l250_m2_e1homalt
74.7056
61.6667
94.7368
96.4912
37233622
100.0000
anovak-vgINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
98.6301
33111
100.0000
anovak-vgINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
98.2143
30111
100.0000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
98.5507
22111
100.0000
anovak-vgINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
98.0769
20111
100.0000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
55.3846
42.8571
78.2609
99.2474
18241855
100.0000
anovak-vgINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
8.6957
4.7619
50.0000
75.0000
120111
100.0000