PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
8101-8150 / 86044 show all
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
0237000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
013000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
01000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
012000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jpowers-varprowlINDELI6_15map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlINDELI6_15map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
022000
jpowers-varprowlINDELI6_15map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
022000
jpowers-varprowlINDELI6_15map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
022000
jpowers-varprowlINDELI6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELI6_15map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELI6_15map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELI6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15map_l150_m0_e0homalt
66.6667
50.0000
100.0000
92.5926
22200
jpowers-varprowlINDELI6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELI6_15map_l150_m1_e0homalt
60.0000
42.8571
100.0000
93.3333
34300
jpowers-varprowlINDELI6_15map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELI6_15map_l150_m2_e0homalt
60.0000
42.8571
100.0000
94.7368
34300
jpowers-varprowlINDELI6_15map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELI6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
98.7500
10100
jpowers-varprowlINDELI6_15map_l250_m0_e0het
0.0000
100.0000
00000
jpowers-varprowlINDELI6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.1176
10100
jpowers-varprowlINDELI6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15map_l250_m1_e0homalt
50.0000
33.3333
100.0000
96.2963
12100
jpowers-varprowlINDELI6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15map_l250_m2_e0homalt
50.0000
33.3333
100.0000
96.4286
12100
jpowers-varprowlINDELI6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15map_l250_m2_e1homalt
50.0000
33.3333
100.0000
96.5517
12100
jpowers-varprowlINDELI6_15map_sirenhetalt
0.0000
1.3889
0.0000
0.0000
171000
jpowers-varprowlINDELI6_15segduphetalt
0.0000
0.0000
0.0000
045000
jpowers-varprowlINDELI6_15segdupwithalt*
0.0000
100.0000
00000
jpowers-varprowlINDELI6_15segdupwithalthet
0.0000
100.0000
00000
jpowers-varprowlINDELI6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
jpowers-varprowlINDELI6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELI6_15tech_badpromotershomalt
50.0000
33.3333
100.0000
66.6667
12100
jpowers-varprowlSNP**hetalt
0.0000
0.0000
0.0000
0871000
jpowers-varprowlSNP*HG002complexvarhetalt
0.0000
0.0000
0.0000
0310000
jpowers-varprowlSNP*HG002compoundhethetalt
0.0000
0.0000
0.0000
0862000
jpowers-varprowlSNP*decoy*
0.0000
100.0000
00000
jpowers-varprowlSNP*decoyhet
0.0000
100.0000
00000
jpowers-varprowlSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNP*decoyhomalt
0.0000
100.0000
00000
jpowers-varprowlSNP*func_cdshetalt
0.0000
0.0000
0.0000
010000
jpowers-varprowlSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000