PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81301-81350 / 86044 show all
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.8483
99.7230
99.9740
62.7618
11520321152033
100.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_11to50*
98.3834
96.8782
99.9360
67.6999
4686151468633
100.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_11to50het
97.5443
95.2668
99.9334
69.5454
2999149299922
100.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_diTR_11to50homalt
99.9111
99.8815
99.9407
63.6892
16862168611
100.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9319
99.9546
99.9092
41.8384
22001220022
100.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
99.9875
100.0000
99.9749
33.2441
39870398711
100.0000
raldana-dualsentieonSNPtilowcmp_SimpleRepeat_triTR_11to50homalt
99.9650
100.0000
99.9300
26.8817
14270142711
100.0000
raldana-dualsentieonSNPtimap_l100_m0_e0hetalt
96.5517
100.0000
93.3333
59.4595
1401411
100.0000
raldana-dualsentieonSNPtimap_l100_m1_e0hetalt
98.3051
100.0000
96.6667
62.9630
2902911
100.0000
raldana-dualsentieonSNPtimap_l100_m2_e0hetalt
98.3607
100.0000
96.7742
65.1685
3003011
100.0000
raldana-dualsentieonSNPtimap_l100_m2_e1hetalt
98.4127
100.0000
96.8750
64.8352
3103111
100.0000
raldana-dualsentieonSNPtimap_sirenhetalt
98.2456
98.2456
98.2456
65.4545
5615611
100.0000
raldana-dualsentieonSNPtimap_sirenhomalt
99.8878
99.8127
99.9630
48.3820
3784571378391414
100.0000
raldana-dualsentieonSNPtisegduphomalt
99.9134
99.8668
99.9600
87.2078
749510749533
100.0000
raldana-dualsentieonSNPtitech_badpromoters*
98.2249
97.6471
98.8095
42.8571
8328311
100.0000
raldana-dualsentieonSNPtitech_badpromotershomalt
98.7952
100.0000
97.6190
40.8451
4104111
100.0000
raldana-dualsentieonSNPtv*hetalt
99.7125
99.5408
99.8848
38.3960
867486711
100.0000
raldana-dualsentieonSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9306
99.8911
99.9703
61.3700
10086111008633
100.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.3062
98.8166
99.8008
85.8631
501650111
100.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.4652
99.1471
99.7854
85.1071
465446511
100.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
99.7732
99.6038
99.9432
60.7007
17607176011
100.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9614
99.9743
99.9486
59.3220
38861388622
100.0000
raldana-dualsentieonSNPtvmap_l100_m0_e0hetalt
96.9697
100.0000
94.1176
64.5833
1601611
100.0000
raldana-dualsentieonSNPtvmap_l100_m1_e0hetalt
96.2963
95.1220
97.5000
65.5172
3923911
100.0000
raldana-dualsentieonSNPtvmap_l100_m2_e0hetalt
96.3855
95.2381
97.5610
68.4615
4024011
100.0000
raldana-dualsentieonSNPtvmap_l100_m2_e1hetalt
96.4706
95.3488
97.6190
68.1818
4124111
100.0000
raldana-dualsentieonSNPtvmap_sirenhetalt
97.5000
96.2963
98.7342
67.0833
7837811
100.0000
raldana-dualsentieonSNPtvmap_sirenhomalt
99.9013
99.8318
99.9710
52.2802
17211291720855
100.0000
raldana-dualsentieonSNPtvsegduphomalt
99.8765
99.9382
99.8149
89.2756
32362323666
100.0000
raldana-dualsentieonSNPtvtech_badpromoters*
97.9021
97.2222
98.5915
49.6454
7027011
100.0000
raldana-dualsentieonSNPtvtech_badpromotershomalt
97.4359
97.4359
97.4359
50.6329
3813811
100.0000
rpoplin-dv42INDEL*func_cds*
98.8729
98.4270
99.3228
93.2232
438744033
100.0000
rpoplin-dv42INDEL*func_cdshet
98.5959
98.1308
99.0654
47.2906
210421222
100.0000
rpoplin-dv42INDEL*func_cdshomalt
99.3348
99.1150
99.5556
35.7143
224222411
100.0000
rpoplin-dv42INDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
91.0405
84.0481
99.3020
38.2843
321461032722323
100.0000
rpoplin-dv42INDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
82.0513
80.0000
84.2105
99.9474
1641633
100.0000
rpoplin-dv42INDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
84.6154
91.6667
78.5714
99.2269
1111133
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
84.8485
82.3529
87.5000
99.9550
1431422
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
85.7143
90.0000
81.8182
99.3612
91922
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.4815
93.9914
99.1071
75.0834
2191422222
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.5368
94.6970
98.4496
79.6850
125712722
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
90.5987
83.2905
99.3127
36.1667
226845523121616
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
66.6667
66.6667
66.6667
99.5208
21211
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
96.7742
20211
100.0000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_diTR_51to200hetalt
82.9823
71.2460
99.3478
28.6268
89236091466
100.0000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8805
99.8672
99.8937
56.0776
1128115112801212
100.0000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
90.9015
84.6774
98.1132
99.9441
1051910422
100.0000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
90.1080
83.9080
97.2973
99.8986
73147222
100.0000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.2023
96.7189
99.7319
41.3917
259488260477
100.0000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_quadTR_51to200hetalt
94.9496
91.0460
99.2028
32.8775
1088107112099
100.0000