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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81151-81200 / 86044 show all
rpoplin-dv42INDELI16_PLUSsegduphet
97.9592
100.0000
96.0000
91.6667
2402411
100.0000
rpoplin-dv42INDELI1_5HG002compoundhethetalt
96.6553
93.5940
99.9237
57.4617
104617161047688
100.0000
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
89.1786
80.8250
99.4580
43.1871
72517273444
100.0000
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
95.6989
94.3463
97.0909
72.3061
2671626788
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
95.9920
92.6052
99.6360
39.6618
546043654752020
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.4848
97.5000
99.4898
65.3710
195519511
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.7376
96.4286
99.0826
75.1708
108410811
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4790
96.6667
98.3051
81.6770
5825811
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
89.5684
81.4873
99.4286
37.8698
51511752233
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
89.4410
87.8049
91.1392
77.4286
72107277
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.8100
92.2531
99.6523
26.1175
428736042991515
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.6894
93.8694
99.6841
24.6230
378224737871212
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
95.7653
92.1626
99.6610
30.6426
439837444101515
100.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.9920
92.6052
99.6360
39.6618
546043654752020
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.6406
93.7451
99.7207
30.0781
356723835701010
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
98.1200
97.1631
99.0958
72.4464
5481654855
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
59.4059
43.6893
92.7835
59.2437
901169077
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
20.5128
14.8148
33.3333
91.0891
423366
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
64.6644
48.0447
98.8636
26.6667
86938711
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.5344
99.3802
99.6891
63.3219
962696233
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.4769
97.1706
99.8188
42.1384
109932110222
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
93.1476
87.5576
99.5000
42.6934
1902719911
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
99.1803
01011
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
99.4756
99.2381
99.7143
61.1399
10428104733
100.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_triTR_11to50het
99.4713
99.5745
99.3684
67.9054
468247233
100.0000
rpoplin-dv42INDELI1_5map_l150_m0_e0homalt
99.2593
100.0000
98.5294
88.9610
6706711
100.0000
rpoplin-dv42INDELI1_5segduphomalt
99.1543
99.1543
99.1543
92.6746
469446944
100.0000
rpoplin-dv42INDELI6_15HG002complexvarhetalt
95.0851
90.9240
99.6454
54.5161
1112111112444
100.0000
rpoplin-dv42INDELI6_15HG002compoundhethetalt
95.0099
90.5470
99.9355
28.7042
7730807774255
100.0000
rpoplin-dv42INDELI6_15HG002compoundhethomalt
48.8189
100.0000
32.2917
75.1295
310316565
100.0000
rpoplin-dv42INDELI6_15func_cds*
97.6744
97.6744
97.6744
36.7647
4214211
100.0000
rpoplin-dv42INDELI6_15func_cdshomalt
96.7742
100.0000
93.7500
36.0000
1501511
100.0000
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
86.7813
76.7925
99.7573
48.6284
40712341111
100.0000
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
88.2883
83.0508
94.2308
77.3913
49104933
100.0000
rpoplin-dv42INDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.7187
94.7933
98.7241
70.9453
6193461988
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
93.6827
88.3154
99.7447
41.6713
3114412312688
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
94.8557
91.6364
98.3095
69.4841
756697561313
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
91.1765
86.1111
96.8750
70.9091
3153111
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
95.5056
92.3913
98.8372
69.0647
8578511
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
84.4444
79.1667
90.4762
80.0000
1951922
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
92.8940
87.0028
99.6409
34.1996
2209330222088
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
92.0792
88.1517
96.3731
68.2566
1862518677
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
93.8172
88.6758
99.5914
32.3428
1942248195088
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
93.0748
89.3617
97.1098
66.2109
1682016855
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
92.8925
86.9894
99.6550
36.0629
2300344231188
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
93.3110
89.7106
97.2125
69.4681
2793227988
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
93.6827
88.3154
99.7447
41.6713
3114412312688
100.0000
rpoplin-dv42INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
94.8557
91.6364
98.3095
69.4841
756697561313
100.0000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
92.3921
86.0531
99.7392
40.4272
1524247153044
100.0000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
95.0495
94.1176
96.0000
76.9231
144914466
100.0000