PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
8001-8050 / 86044 show all
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.3228
0.0000
0.0000
154632000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.2234
0.0000
0.0000
94020000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.3562
0.0000
0.0000
174755000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.5767
0.0000
0.0000
345862000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.5782
0.0000
0.0000
223783000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
36.3636
22.2222
100.0000
98.2456
621100
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0179000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.3165
0.0000
0.0000
1315000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
1.4147
0.0000
0.0000
161115000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.4608
0.0000
0.0000
1216000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
1.2780
0.0000
0.0000
4309000
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
66.6667
50.0000
100.0000
94.4444
11100
jpowers-varprowlINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
023000
jpowers-varprowlINDELI1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELI1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
044000
jpowers-varprowlINDELI1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
044000
jpowers-varprowlINDELI1_5map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
045000
jpowers-varprowlINDELI1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlINDELI1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
017000
jpowers-varprowlINDELI1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELI1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELI1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELI1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELI1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELI1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
010000
jpowers-varprowlINDELI1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5map_l250_m0_e0homalt
94.1176
88.8889
100.0000
96.1353
81800
jpowers-varprowlINDELI1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5map_sirenhetalt
0.0000
0.0000
0.0000
0112000
jpowers-varprowlINDELI1_5segduphetalt
0.0000
0.0000
0.0000
048000
jpowers-varprowlINDELI1_5segdupwithalt*
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5segdupwithalthet
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
jpowers-varprowlINDELI1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI1_5tech_badpromotershomalt
86.9565
76.9231
100.0000
64.2857
1031000