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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1595 1596 1597 1598 1599 1600 1601 1602 1603 ... 1720 1721 » 79901-79950 / 86044 show all
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	92.1348	89.1304	95.3488	63.8655	41	5	41	2	2	100.0000
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het	78.9474	75.0000	83.3333	88.4615	6	2	5	1	1	100.0000
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt	96.2963	100.0000	92.8571	46.1538	13	0	13	1	1	100.0000
hfeng-pmm2	INDEL	D1_5	HG002compoundhet	homalt	89.0601	99.3127	80.7263	78.1840	289	2	289	69	69	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.9456	97.0745	96.8170	60.7087	730	22	730	24	24	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.7580	99.7808	99.7353	72.9432	21851	48	21851	58	58	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.2948	99.3780	99.2118	59.1033	8308	52	8308	66	66	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	95.9157	96.0422	95.7895	59.7031	364	15	364	16	16	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.0240	99.1401	98.9082	42.6607	5073	44	5073	56	56	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.2750	99.3899	99.1604	41.1634	4724	29	4724	40	40	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.1031	99.1903	99.0160	51.1670	5635	46	5635	56	56	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.2948	99.3780	99.2118	59.1033	8308	52	8308	66	66	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.5103	99.5446	99.4760	35.3827	7214	33	7214	38	38	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	82.1918	84.5070	80.0000	56.3953	60	11	60	15	15	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9312	99.9214	99.9410	54.0442	10170	8	10170	6	6	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8228	99.8636	99.7820	48.9282	3661	5	3661	8	8	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.9848	98.9848	98.9848	56.8928	195	2	195	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	55.8824	13	0	13	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l100_m0_e0	homalt	99.4197	99.6124	99.2278	81.9638	257	1	257	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l100_m1_e0	homalt	99.5773	99.4932	99.6616	80.9170	589	3	589	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l100_m2_e0	homalt	99.5905	99.5090	99.6721	81.7529	608	3	608	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l100_m2_e1	homalt	99.5964	99.5161	99.6769	81.8369	617	3	617	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l125_m0_e0	homalt	98.9899	99.3243	98.6577	85.6868	147	1	147	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l125_m1_e0	homalt	99.4269	99.4269	99.4269	83.7068	347	2	347	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l125_m2_e0	homalt	99.4505	99.4505	99.4505	84.6219	362	2	362	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l125_m2_e1	homalt	99.4624	99.4624	99.4624	84.6217	370	2	370	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l150_m0_e0	homalt	99.4152	100.0000	98.8372	89.0724	85	0	85	1	1	100.0000
hfeng-pmm2	INDEL	D1_5	map_l150_m1_e0	homalt	99.3407	99.1228	99.5595	86.2424	226	2	226	1	1	100.0000
hfeng-pmm2	INDEL	D1_5	map_l150_m2_e0	homalt	99.3789	99.1736	99.5851	87.0500	240	2	240	1	1	100.0000
hfeng-pmm2	INDEL	D1_5	map_l150_m2_e1	homalt	99.1935	99.1935	99.1935	86.9679	246	2	246	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_siren	homalt	99.6580	99.6575	99.6584	78.7708	1164	4	1167	4	4	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.2379	87.4049	99.9050	31.0740	2068	298	2103	2	2	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	98.5075	97.3958	99.6448	66.8042	561	15	561	2	2	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.3814	98.9733	99.7930	65.0253	482	5	482	1	1	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.9204	86.8267	99.9340	30.1521	1483	225	1514	1	1	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	95.2915	97.2540	93.4066	47.6410	425	12	425	30	30	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	*	84.8790	77.9848	93.1104	42.5160	921	260	919	68	68	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	74.0454	79.7297	69.1176	73.4893	118	30	94	42	42	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	85.5100	74.7706	99.8519	27.0270	652	220	674	1	1	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	89.6142	93.7888	85.7955	36.9176	151	10	151	25	25	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	89.1470	91.9890	86.4754	82.1898	333	29	211	33	33	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	94.3523	89.5265	99.7279	38.0270	624	73	733	2	2	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.6223	93.5683	99.8824	33.7490	1513	104	1698	2	2	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.5605	93.4506	99.8846	36.0517	1541	108	1731	2	2	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.6688	93.6820	99.8523	38.6219	1809	122	2028	3	3	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het	76.6255	94.6746	64.3564	81.0507	160	9	65	36	36	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	98.6301	97.6017	99.6805	67.8645	936	23	936	3	3	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	98.0909	96.7581	99.4609	78.0343	388	13	369	2	2	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.3464	99.1304	99.5633	66.6181	228	2	228	1	1	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	97.0242	95.4545	98.6464	64.6742	588	28	583	8	8	100.0000

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