PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
79101-79150 / 86044 show all
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
86.4554
77.3846
97.9351
23.6486
50314733277
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
97.6832
96.5368
98.8571
39.8625
4461617322
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.3995
99.6241
99.1760
40.3752
1325513241111
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
89.5864
85.3333
94.2857
58.3333
64116644
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
86.6667
100.0000
76.4706
60.4651
1301344
100.0000
gduggal-bwafbINDELD1_5map_l100_m0_e0homalt
99.2218
98.8372
99.6094
86.6736
255325511
100.0000
gduggal-bwafbINDELD1_5map_l100_m1_e0hetalt
79.4045
68.0851
95.2381
93.5385
32152011
100.0000
gduggal-bwafbINDELD1_5map_l100_m1_e0homalt
99.1521
98.8176
99.4889
84.7770
585758433
100.0000
gduggal-bwafbINDELD1_5map_l100_m2_e0hetalt
79.9308
68.7500
95.4545
93.6047
33152111
100.0000
gduggal-bwafbINDELD1_5map_l100_m2_e0homalt
99.1786
98.8543
99.5050
85.3976
604760333
100.0000
gduggal-bwafbINDELD1_5map_l100_m2_e1hetalt
77.1285
64.7059
95.4545
93.7143
33182111
100.0000
gduggal-bwafbINDELD1_5map_l100_m2_e1homalt
98.9468
98.5484
99.3485
85.4812
611961044
100.0000
gduggal-bwafbINDELD1_5map_l125_m0_e0homalt
99.3243
99.3243
99.3243
89.8769
147114711
100.0000
gduggal-bwafbINDELD1_5map_l125_m1_e0homalt
99.1379
98.8539
99.4236
87.3818
345434522
100.0000
gduggal-bwafbINDELD1_5map_l125_m2_e0homalt
99.1736
98.9011
99.4475
87.9894
360436022
100.0000
gduggal-bwafbINDELD1_5map_l125_m2_e1homalt
99.0553
98.6559
99.4580
88.0078
367536722
100.0000
gduggal-bwafbINDELD1_5map_l150_m0_e0homalt
98.8235
98.8235
98.8235
92.7039
8418411
100.0000
gduggal-bwafbINDELD1_5map_l150_m1_e0homalt
98.6784
98.2456
99.1150
89.6092
224422422
100.0000
gduggal-bwafbINDELD1_5map_l150_m2_e0homalt
98.5447
97.9339
99.1632
90.1240
237523722
100.0000
gduggal-bwafbINDELD1_5map_l150_m2_e1homalt
98.5801
97.9839
99.1837
90.0770
243524322
100.0000
gduggal-bwafbINDELD1_5map_sirenhetalt
84.8684
75.0000
97.7273
92.9487
63214311
100.0000
gduggal-bwafbINDELD1_5segduphetalt
94.1742
94.2308
94.1176
97.6902
4931611
100.0000
gduggal-bwafbINDELD6_15*hetalt
90.9853
84.6464
98.3504
52.1249
6919125512522121
100.0000
gduggal-bwafbINDELD6_15HG002complexvarhetalt
88.4177
83.7117
93.6842
66.0714
8481651781212
100.0000
gduggal-bwafbINDELD6_15HG002compoundhethetalt
91.1254
84.6645
98.6540
40.8708
6901125012461717
100.0000
gduggal-bwafbINDELD6_15func_cds*
89.1566
86.0465
92.5000
51.8072
3763733
100.0000
gduggal-bwafbINDELD6_15func_cdshet
89.8273
89.6552
90.0000
47.3684
2632733
100.0000
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
82.4503
70.7523
98.7826
36.8825
167469256877
100.0000
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
60.0000
50.0000
75.0000
97.9899
33311
100.0000
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
98.3871
01011
100.0000
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
93.1550
88.6524
98.1395
56.7404
60397738441616
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
90.8745
84.4894
98.3036
44.9837
6809125011592020
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
76.5957
69.2308
85.7143
83.7209
2712611
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
86.0465
86.0465
86.0465
75.1445
3763766
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
57.1429
50.0000
66.6667
98.4211
22211
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
98.3607
00011
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
83.5360
76.8142
91.5470
43.3092
21176392296212212
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
86.0757
76.5957
98.2337
44.2424
46814314462626
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
83.1268
71.4871
99.2941
36.3772
122148742233
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
81.6794
97.9405
70.0491
45.2509
4289428183183
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
91.8646
85.7424
98.9282
41.1728
609810149231010
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
90.9626
99.2511
83.9517
58.3543
2783212783532532
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
94.0939
89.9412
98.6486
45.1271
489154751177
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
92.8529
99.4937
87.0432
60.7107
2358122358351351
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
91.6751
85.4753
98.8445
42.9599
613210429411111
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
90.8745
84.4894
98.3036
44.9837
6809125011592020
100.0000
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
93.2232
88.4116
98.5887
45.8515
421955348977
100.0000
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_diTR_51to200*
73.6947
65.2837
84.5936
37.0238
771410895163163
100.0000
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_diTR_51to200het
79.6945
66.8919
98.5577
39.0625
994961599
100.0000
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
66.5254
97.5155
50.4823
35.8763
1574157154154
100.0000