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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1470 1471 1472 1473 1474 1475 1476 1477 1478 ... 1720 1721 » 73651-73700 / 86044 show all
gduggal-bwavard	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	84.1187	95.1327	75.3903	72.1991	5805	297	5747	1876	1702	90.7249
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.3072	99.0383	99.5775	51.0793	16271	158	35588	151	137	90.7285
gduggal-bwavard	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	65.1709	54.2531	81.5900	69.4864	8451	7126	8323	1878	1704	90.7348
gduggal-bwaplat	INDEL	D1_5	HG002compoundhet	homalt	64.7761	74.5704	57.2559	81.8487	217	74	217	162	147	90.7407
jli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.9179	98.5780	99.2602	53.6895	7279	105	7245	54	49	90.7407
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	92.8572	96.8783	89.1566	74.3497	931	30	888	108	98	90.7407
anovak-vg	SNP	ti	map_l125_m1_e0	homalt	89.7681	81.8379	99.4000	64.4522	9039	2006	8946	54	49	90.7407
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	34.7826	48.7805	27.0270	82.1256	20	21	20	54	49	90.7407
eyeh-varpipe	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	95.7997	94.0020	97.6675	65.5892	5736	366	36639	875	794	90.7429
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.2755	98.9912	99.5615	74.4850	63781	650	63794	281	255	90.7473
hfeng-pmm3	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	96.9182	95.5942	98.2795	62.6246	13973	644	13595	238	216	90.7563
qzeng-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.8442	97.6336	96.0674	58.0189	3672	89	5814	238	216	90.7563
qzeng-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.8442	97.6336	96.0674	58.0189	3672	89	5814	238	216	90.7563
astatham-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.9849	94.4009	95.5762	69.0899	9509	564	9355	433	393	90.7621
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	47.1992	32.7962	84.1592	58.8707	1038	2127	1036	195	177	90.7692
rpoplin-dv42	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	88.9263	93.1683	85.0537	75.7901	3764	276	3642	640	581	90.7813
ndellapenna-hhga	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	93.9899	93.5543	94.4295	71.2140	60278	4153	60365	3561	3233	90.7891
dgrover-gatk	INDEL	D6_15	HG002complexvar	*	98.2978	98.0385	98.5584	58.5437	5198	104	5196	76	69	90.7895
hfeng-pmm1	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.2447	97.1397	99.3753	55.6990	15588	459	15589	98	89	90.8163
gduggal-bwavard	INDEL	D6_15	HG002complexvar	het	83.6960	96.5705	73.8504	58.8480	3013	107	2923	1035	940	90.8213
rpoplin-dv42	INDEL	D6_15	HG002complexvar	*	97.1394	96.3787	97.9123	57.5494	5110	192	5112	109	99	90.8257
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	97.8086	98.8224	96.8153	66.1962	13595	162	13589	447	406	90.8277
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	97.8086	98.8224	96.8153	66.1962	13595	162	13589	447	406	90.8277
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	85.6704	84.8021	86.5567	80.2451	36749	6586	37209	5779	5249	90.8289
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	94.4040	96.4646	92.4295	77.5992	2101	77	1868	153	139	90.8497
ndellapenna-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	86.9809	86.1182	87.8610	55.6334	27048	4360	27135	3749	3406	90.8509
ndellapenna-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	86.9809	86.1182	87.8610	55.6334	27048	4360	27135	3749	3406	90.8509
mlin-fermikit	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	89.7993	95.4044	84.8163	74.1070	1038	50	1039	186	169	90.8602
asubramanian-gatk	INDEL	I6_15	*	*	96.7639	95.5082	98.0531	53.5929	23708	1115	23721	471	428	90.8705
raldana-dualsentieon	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.0349	98.5054	99.5702	72.8907	63468	963	63480	274	249	90.8759
mlin-fermikit	INDEL	D6_15	segdup	het	89.9018	91.3043	88.5417	91.7241	84	8	85	11	10	90.9091
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	82.8241	83.7838	81.8862	84.4940	558	108	547	121	110	90.9091
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	90.3250	96.7213	84.7222	88.5350	59	2	61	11	10	90.9091
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	82.8241	83.7838	81.8862	84.4940	558	108	547	121	110	90.9091
mlin-fermikit	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	97.9157	97.2833	98.5564	70.7710	752	21	751	11	10	90.9091
mlin-fermikit	INDEL	I6_15	map_l100_m1_e0	*	76.2909	67.5439	87.6404	81.8367	77	37	78	11	10	90.9091
mlin-fermikit	INDEL	I6_15	map_l100_m2_e0	*	76.7503	68.1034	87.9121	83.6036	79	37	80	11	10	90.9091
mlin-fermikit	INDEL	I6_15	map_l100_m2_e1	*	76.7503	68.1034	87.9121	83.9789	79	37	80	11	10	90.9091
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	95.4200	94.0678	96.8116	67.6966	333	21	334	11	10	90.9091
qzeng-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	88.7617	87.5000	90.0602	60.8952	252	36	598	66	60	90.9091
ndellapenna-hhga	SNP	ti	map_siren	homalt	99.8244	99.7072	99.9418	51.3860	37805	111	37806	22	20	90.9091
ndellapenna-hhga	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	81.2517	69.3391	98.1067	37.6609	640	283	570	11	10	90.9091
ndellapenna-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.6789	94.2328	99.2552	26.5783	4379	268	4398	33	30	90.9091
ndellapenna-hhga	INDEL	I6_15	*	hetalt	95.2209	91.6969	99.0267	38.6839	7841	710	7834	77	70	90.9091
ndellapenna-hhga	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.0531	98.7414	99.3667	63.5237	1726	22	1726	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m1_e0	homalt	99.6799	99.4589	99.9020	69.8014	11212	61	11212	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m2_e0	homalt	99.6916	99.4786	99.9056	72.3853	11638	61	11638	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m2_e1	homalt	99.6950	99.4842	99.9066	72.4121	11766	61	11766	11	10	90.9091
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	98.1090	96.6453	99.6177	51.2288	5733	199	5733	22	20	90.9091
egarrison-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	76.5171	62.3875	98.9208	32.6004	4296	2590	4033	44	40	90.9091

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