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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1468 1469 1470 1471 1472 1473 1474 1475 1476 ... 1720 1721 » 73551-73600 / 86044 show all
gduggal-bwavard	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	31.3390	84.6154	19.2308	69.2308	11	2	10	42	38	90.4762
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	87.7895	79.0971	98.6283	41.6540	1279	338	1510	21	19	90.4762
egarrison-hhga	INDEL	I1_5	HG002compoundhet	homalt	78.9281	98.4802	65.8537	81.8115	324	5	324	168	152	90.4762
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	92.5926	94.7867	90.4977	51.4286	200	11	200	21	19	90.4762
ciseli-custom	INDEL	D6_15	map_siren	homalt	66.5025	82.3077	55.7895	83.1709	107	23	106	84	76	90.4762
cchapple-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.0612	88.8224	97.7248	55.9006	890	112	902	21	19	90.4762
ckim-dragen	SNP	*	map_siren	homalt	99.7220	99.5214	99.9236	48.9049	54892	264	54896	42	38	90.4762
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.1082	92.7162	93.5035	64.4487	1222	96	1209	84	76	90.4762
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.5824	99.3478	97.8288	50.3389	4722	31	4731	105	95	90.4762
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	61.6716	83.8235	48.7805	53.5849	57	11	60	63	57	90.4762
astatham-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.8600	99.6324	98.0995	67.6806	1084	4	1084	21	19	90.4762
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	90.2936	98.1609	83.5938	71.7906	427	8	428	84	76	90.4762
ghariani-varprowl	INDEL	D6_15	map_l125_m1_e0	*	78.4141	76.0684	80.9091	92.1090	89	28	89	21	19	90.4762
ghariani-varprowl	INDEL	D6_15	map_l125_m1_e0	het	84.3537	96.8750	74.6988	93.2134	62	2	62	21	19	90.4762
ghariani-varprowl	INDEL	D6_15	map_l125_m2_e0	*	79.5082	76.9841	82.2034	92.3674	97	29	97	21	19	90.4762
ghariani-varprowl	INDEL	D6_15	map_l125_m2_e0	het	85.0000	95.7746	76.4045	93.4317	68	3	68	21	19	90.4762
gduggal-snapvard	INDEL	*	HG002complexvar	homalt	88.0378	80.0821	97.7484	41.5287	21643	5383	21880	504	456	90.4762
mlin-fermikit	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	95.8242	95.3125	96.3415	60.8992	549	27	553	21	19	90.4762
ndellapenna-hhga	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.5795	92.5795	92.5795	69.2391	262	21	262	21	19	90.4762
ndellapenna-hhga	SNP	*	map_l100_m1_e0	homalt	99.7849	99.6482	99.9220	59.8338	26908	95	26908	21	19	90.4762
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het	88.2174	92.0732	84.6715	84.6413	151	13	116	21	19	90.4762
rpoplin-dv42	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.9893	96.9635	99.0370	71.9042	15104	473	15118	147	133	90.4762
ndellapenna-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.3946	98.1976	98.5925	80.3787	1471	27	1471	21	19	90.4762
qzeng-custom	SNP	*	segdup	homalt	99.2653	99.1250	99.4061	87.8458	10649	94	10544	63	57	90.4762
rpoplin-dv42	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.3392	99.0283	99.6520	55.6062	6013	59	6013	21	19	90.4762
hfeng-pmm3	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.4735	88.5110	99.0255	55.9755	2134	277	2134	21	19	90.4762
hfeng-pmm1	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	*	80.5324	69.4405	95.8416	48.3640	484	213	484	21	19	90.4762
jli-custom	INDEL	*	HG002complexvar	homalt	99.8318	99.8964	99.7673	56.4104	26999	28	27007	63	57	90.4762
hfeng-pmm2	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	92.4568	90.6336	94.3548	75.3152	1974	204	1755	105	95	90.4762
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	94.6208	90.1948	99.5035	32.1162	8380	911	8417	42	38	90.4762
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	94.6208	90.1948	99.5035	32.1162	8380	911	8417	42	38	90.4762
ciseli-custom	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	65.1835	87.6412	51.8876	46.8905	9077	1280	9044	8386	7588	90.4841
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	96.1122	95.6040	96.6259	60.2914	41430	1905	41238	1440	1303	90.4861
ciseli-custom	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	51.2986	77.9991	38.2164	61.6156	1723	486	1727	2792	2527	90.5086
ghariani-varprowl	INDEL	I6_15	HG002compoundhet	homalt	11.7284	61.2903	6.4846	55.1988	19	12	19	274	248	90.5109
gduggal-bwavard	INDEL	D6_15	HG002complexvar	*	76.1590	74.2173	78.2051	56.8522	3935	1367	3782	1054	954	90.5123
mlin-fermikit	SNP	ti	map_l250_m1_e0	homalt	53.4856	42.2526	72.8541	73.1257	679	928	679	253	229	90.5138
gduggal-bwafb	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	95.5779	93.7628	97.4647	70.7003	88558	5891	94531	2459	2226	90.5246
asubramanian-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	91.6225	98.8558	85.3755	48.1026	432	5	432	74	67	90.5405
asubramanian-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	80.4071	98.1366	68.1034	35.1955	158	3	158	74	67	90.5405
ndellapenna-hhga	INDEL	I1_5	*	hetalt	97.0167	94.8280	99.3087	62.5367	10616	579	10630	74	67	90.5405
ltrigg-rtg2	INDEL	I6_15	HG002compoundhet	*	96.9852	94.9521	99.1073	33.0128	8333	443	8215	74	67	90.5405
qzeng-custom	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	65.9107	59.0529	74.5704	50.3413	212	147	217	74	67	90.5405
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.8754	99.0250	98.7263	71.7769	5789	57	5736	74	67	90.5405
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.8754	99.0250	98.7263	71.7769	5789	57	5736	74	67	90.5405
ndellapenna-hhga	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	87.5209	83.4104	92.0575	35.5502	1443	287	1472	127	115	90.5512
mlin-fermikit	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	87.9424	86.3802	89.5622	71.3205	3076	485	3089	360	326	90.5556
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	97.6874	96.9552	98.4307	49.3864	5668	178	14614	233	211	90.5579
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	97.6874	96.9552	98.4307	49.3864	5668	178	14614	233	211	90.5579
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	94.2123	89.8860	98.9760	27.5881	4888	550	5123	53	48	90.5660

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