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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1220 1221 1222 1223 1224 1225 1226 1227 1228 ... 1720 1721 » 61151-61200 / 86044 show all
hfeng-pmm2	SNP	*	map_l125_m2_e1	homalt	99.8146	99.8175	99.8118	69.0869	17500	32	17500	33	14	42.4242
rpoplin-dv42	SNP	tv	*	*	99.9512	99.9420	99.9604	21.8980	969128	562	969027	384	163	42.4479
ltrigg-rtg1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.5832	95.9437	99.2798	56.3557	30134	1274	30188	219	93	42.4658
ltrigg-rtg1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.5832	95.9437	99.2798	56.3557	30134	1274	30188	219	93	42.4658
ltrigg-rtg1	INDEL	*	HG002complexvar	het	98.9136	98.2515	99.5847	53.0906	45404	808	44604	186	79	42.4731
ndellapenna-hhga	SNP	*	map_l150_m0_e0	het	98.0583	96.6751	99.4816	79.2753	7676	264	7676	40	17	42.5000
mlin-fermikit	INDEL	*	map_l125_m1_e0	het	66.1838	50.9363	94.4598	80.5181	680	655	682	40	17	42.5000
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	92.5559	94.4948	90.6950	66.9104	2918	170	3119	320	136	42.5000
asubramanian-gatk	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.4217	98.4028	98.4406	75.5838	47500	771	49303	781	332	42.5096
qzeng-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	het	85.6204	89.4628	82.0945	59.1015	866	102	2728	595	253	42.5210
gduggal-snapfb	SNP	*	map_l125_m2_e1	*	96.9532	97.0065	96.9000	74.6410	45789	1413	45793	1465	623	42.5256
gduggal-bwavard	INDEL	D16_PLUS	map_l100_m1_e0	het	60.6733	86.9565	46.5909	92.8397	40	6	41	47	20	42.5532
gduggal-bwafb	SNP	*	HG002complexvar	*	99.8109	99.7664	99.8554	20.0831	752623	1762	752783	1090	464	42.5688
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	82.7904	78.6275	87.4187	53.2630	15617	4245	16259	2340	997	42.6068
egarrison-hhga	INDEL	*	map_l100_m2_e0	het	97.5246	97.9627	97.0903	84.4521	2260	47	2269	68	29	42.6471
ckim-isaac	INDEL	I6_15	HG002complexvar	*	77.4674	68.9900	88.3200	51.9231	3306	1486	3312	438	187	42.6941
ndellapenna-hhga	SNP	*	HG002complexvar	het	99.7473	99.5353	99.9601	18.3091	463334	2163	463353	185	79	42.7027
gduggal-snapfb	SNP	*	map_l125_m2_e0	*	96.9292	96.9758	96.8828	74.5886	45310	1413	45314	1458	623	42.7298
ndellapenna-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.2273	98.7916	99.6668	58.8530	34991	428	34997	117	50	42.7350
rpoplin-dv42	SNP	tv	map_siren	het	99.4388	99.4093	99.4683	57.2644	28440	169	28436	152	65	42.7632
ciseli-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	82.3435	83.6876	81.0419	74.6270	3032	591	3018	706	302	42.7762
anovak-vg	SNP	tv	segdup	*	97.7325	97.6676	97.7974	93.3295	8333	199	8303	187	80	42.7807
gduggal-snapvard	INDEL	D1_5	map_siren	het	89.3607	98.0237	82.1046	85.3259	2232	45	2606	568	243	42.7817
gduggal-snapfb	SNP	*	map_l125_m2_e1	het	96.4602	97.5843	95.3616	73.5220	28924	716	28927	1407	602	42.7861
jpowers-varprowl	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.2176	99.5759	93.0785	81.7232	5400	23	5406	402	172	42.7861
jpowers-varprowl	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.2176	99.5759	93.0785	81.7232	5400	23	5406	402	172	42.7861
ltrigg-rtg1	INDEL	*	map_l125_m2_e1	homalt	99.0968	99.0956	99.0979	85.1341	767	7	769	7	3	42.8571
jli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	95.1323	91.9608	98.5304	80.4728	1407	123	1408	21	9	42.8571
jli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	95.1323	91.9608	98.5304	80.4728	1407	123	1408	21	9	42.8571
jli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	98.9880	99.0063	98.9698	87.7821	2690	27	2690	28	12	42.8571
jli-custom	SNP	*	map_l250_m2_e1	het	97.7120	96.5426	98.9101	87.1957	5082	182	5082	56	24	42.8571
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.3908	98.3908	98.3908	69.9793	428	7	428	7	3	42.8571
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	92.9648	89.8058	96.3542	88.3918	185	21	185	7	3	42.8571
ltrigg-rtg2	INDEL	D16_PLUS	*	het	97.5719	96.3280	98.8483	63.0112	3043	116	3004	35	15	42.8571
ltrigg-rtg1	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.5582	99.2146	99.9041	50.2607	14654	116	14581	14	6	42.8571
ltrigg-rtg1	INDEL	I1_5	map_l100_m0_e0	*	96.9035	95.2118	98.6564	78.2917	517	26	514	7	3	42.8571
ltrigg-rtg1	SNP	ti	map_l125_m0_e0	*	98.6208	97.4926	99.7755	64.1831	12442	320	12442	28	12	42.8571
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.7219	98.3777	99.0685	77.8155	1516	25	1489	14	6	42.8571
jmaeng-gatk	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7764	99.6650	99.8881	47.1210	6247	21	6247	7	3	42.8571
jmaeng-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.2612	99.0548	99.4685	84.3994	2620	25	2620	14	6	42.8571
jpowers-varprowl	INDEL	I1_5	map_l250_m2_e0	het	89.3939	89.3939	89.3939	97.2454	59	7	59	7	3	42.8571
jpowers-varprowl	INDEL	I1_5	map_l250_m2_e1	het	89.3939	89.3939	89.3939	97.3419	59	7	59	7	3	42.8571
gduggal-snapfb	INDEL	I1_5	map_l100_m1_e0	hetalt	74.6450	72.7273	76.6667	91.6435	32	12	23	7	3	42.8571
gduggal-snapfb	INDEL	I1_5	map_l100_m2_e0	hetalt	74.6450	72.7273	76.6667	92.3274	32	12	23	7	3	42.8571
gduggal-snapfb	INDEL	I1_5	map_l100_m2_e1	hetalt	75.3210	73.3333	77.4194	92.1717	33	12	24	7	3	42.8571
gduggal-snapfb	INDEL	I1_5	map_l250_m1_e0	*	92.3810	91.5094	93.2692	96.3636	97	9	97	7	3	42.8571
gduggal-snapvard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	0.0000	0.0000	77.1739	94.4910	0	0	71	21	9	42.8571
gduggal-snapvard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	0.0000	0.0000	77.1739	94.4910	0	0	71	21	9	42.8571
gduggal-snapvard	INDEL	D16_PLUS	map_siren	*	9.6970	5.5944	36.3636	92.6174	8	135	8	14	6	42.8571
gduggal-snapvard	INDEL	D16_PLUS	map_siren	het	14.1414	8.9744	33.3333	92.6056	7	71	7	14	6	42.8571

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