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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1205 1206 1207 1208 1209 1210 1211 1212 1213 ... 1720 1721 » 60401-60450 / 86044 show all
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	40.1458	27.7350	72.6592	88.8238	180	469	194	73	28	38.3562
astatham-gatk	SNP	*	map_l100_m1_e0	het	86.7442	76.7367	99.7535	74.2815	34807	10552	34796	86	33	38.3721
astatham-gatk	SNP	*	map_l100_m2_e0	het	86.8923	76.9650	99.7597	75.4072	35711	10688	35700	86	33	38.3721
ciseli-custom	INDEL	C1_5	HG002compoundhet	homalt	0.0000	0.0000	5.3812	85.0736	0	0	12	211	81	38.3886
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.6938	0.3506	33.1551	66.3366	4	1137	124	250	96	38.4000
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	98.5858	97.9822	99.1968	53.1729	15442	318	15438	125	48	38.4000
gduggal-snapplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	59.6364	59.0060	60.2804	68.5856	4357	3027	6148	4051	1556	38.4103
gduggal-snapfb	SNP	tv	map_l250_m2_e1	homalt	95.8740	93.3404	98.5491	93.5115	883	63	883	13	5	38.4615
gduggal-snapplat	SNP	tv	map_siren	homalt	96.8214	93.9095	99.9197	58.2133	16190	1050	16181	13	5	38.4615
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_homopolymer_gt10	*	63.5631	57.2581	71.4286	99.8537	71	53	65	26	10	38.4615
ckim-isaac	INDEL	*	map_l150_m1_e0	*	74.6172	60.0897	98.4088	90.7075	804	534	804	13	5	38.4615
ckim-isaac	INDEL	*	map_l150_m2_e0	*	74.8018	60.2983	98.4919	91.3653	849	559	849	13	5	38.4615
ckim-isaac	INDEL	*	map_l150_m2_e1	*	74.8271	60.3197	98.5227	91.3700	868	571	867	13	5	38.4615
ckim-isaac	INDEL	*	map_siren	het	87.7323	79.7249	97.5278	80.3155	3594	914	3590	91	35	38.4615
cchapple-custom	INDEL	C6_15	*	het	95.1311	100.0000	90.7143	93.8570	7	0	254	26	10	38.4615
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.8565	99.9202	99.7929	46.2638	6263	5	6265	13	5	38.4615
asubramanian-gatk	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	98.6320	97.9249	99.3493	69.0808	1982	42	1985	13	5	38.4615
asubramanian-gatk	SNP	ti	map_l100_m1_e0	*	61.7256	44.6642	99.8787	83.4799	21408	26523	21404	26	10	38.4615
asubramanian-gatk	SNP	ti	map_l100_m1_e0	het	64.3552	47.4851	99.8174	85.5215	14218	15724	14214	26	10	38.4615
asubramanian-gatk	SNP	ti	map_l150_m2_e0	*	40.8545	25.6874	99.7538	94.2642	5269	15243	5267	13	5	38.4615
asubramanian-gatk	SNP	ti	map_l150_m2_e0	het	44.0116	28.2431	99.6437	94.9202	3638	9243	3636	13	5	38.4615
asubramanian-gatk	SNP	ti	map_l150_m2_e1	*	40.9816	25.7878	99.7572	94.2645	5344	15379	5342	13	5	38.4615
asubramanian-gatk	SNP	ti	map_l150_m2_e1	het	44.1440	28.3519	99.6487	94.9230	3690	9325	3688	13	5	38.4615
gduggal-bwafb	INDEL	D6_15	map_siren	*	92.5116	88.2122	97.2516	82.2846	449	60	460	13	5	38.4615
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.9845	94.5971	99.4954	76.1070	5130	293	5127	26	10	38.4615
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.9845	94.5971	99.4954	76.1070	5130	293	5127	26	10	38.4615
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	het	81.0867	68.5777	99.1772	58.7467	1567	718	1567	13	5	38.4615
jli-custom	INDEL	D1_5	map_l150_m2_e1	*	98.3301	98.3290	98.3312	88.4043	765	13	766	13	5	38.4615
hfeng-pmm3	SNP	tv	HG002complexvar	*	99.8576	99.7315	99.9841	21.7544	245491	661	245404	39	15	38.4615
hfeng-pmm3	SNP	tv	map_l100_m1_e0	homalt	99.8285	99.8010	99.8562	62.3809	9025	18	9025	13	5	38.4615
hfeng-pmm3	SNP	tv	map_l100_m2_e0	homalt	99.8317	99.8046	99.8588	64.7570	9196	18	9196	13	5	38.4615
hfeng-pmm3	SNP	tv	map_l100_m2_e1	homalt	99.8333	99.8065	99.8602	64.7574	9284	18	9284	13	5	38.4615
hfeng-pmm3	SNP	tv	map_l125_m1_e0	homalt	99.7525	99.7270	99.7780	67.2958	5844	16	5844	13	5	38.4615
hfeng-pmm3	SNP	tv	map_l125_m2_e0	homalt	99.7590	99.7341	99.7838	69.7058	6001	16	6001	13	5	38.4615
hfeng-pmm3	SNP	tv	map_l125_m2_e1	homalt	99.7612	99.7366	99.7859	69.7479	6058	16	6058	13	5	38.4615
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5795	99.7661	99.3937	76.6906	2133	5	2131	13	5	38.4615
hfeng-pmm2	SNP	ti	map_l150_m0_e0	homalt	99.6019	99.6740	99.5298	75.8368	2752	9	2752	13	5	38.4615
hfeng-pmm1	SNP	tv	map_l100_m1_e0	homalt	99.8507	99.8452	99.8562	62.4720	9029	14	9029	13	5	38.4615
hfeng-pmm1	SNP	tv	map_l100_m2_e0	homalt	99.8535	99.8481	99.8589	64.8359	9200	14	9200	13	5	38.4615
hfeng-pmm1	SNP	tv	map_l100_m2_e1	homalt	99.8549	99.8495	99.8602	64.8422	9288	14	9288	13	5	38.4615
hfeng-pmm1	SNP	tv	map_l125_m1_e0	homalt	99.7867	99.7952	99.7782	67.3918	5848	12	5848	13	5	38.4615
hfeng-pmm1	SNP	tv	map_l125_m2_e0	homalt	99.7923	99.8006	99.7840	69.7785	6005	12	6005	13	5	38.4615
hfeng-pmm1	SNP	tv	map_l125_m2_e1	homalt	99.7942	99.8024	99.7860	69.8227	6062	12	6062	13	5	38.4615
jli-custom	SNP	ti	map_l150_m0_e0	het	98.3675	97.5280	99.2216	76.7991	4971	126	4971	39	15	38.4615
ltrigg-rtg1	INDEL	I16_PLUS	*	het	92.1773	85.9088	99.4326	48.0027	2335	383	2278	13	5	38.4615
jpowers-varprowl	INDEL	D1_5	map_l150_m0_e0	het	94.3489	95.0495	93.6585	92.6126	192	10	192	13	5	38.4615
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	96.6093	96.3303	96.8900	85.7581	420	16	405	13	5	38.4615
egarrison-hhga	SNP	tv	map_l100_m0_e0	het	99.0740	98.5184	99.6359	68.9508	7115	107	7115	26	10	38.4615
egarrison-hhga	SNP	tv	map_l250_m2_e0	het	98.0955	96.9072	99.3133	87.4569	1880	60	1880	13	5	38.4615
egarrison-hhga	SNP	tv	map_l250_m2_e1	het	98.1200	96.9466	99.3222	87.5276	1905	60	1905	13	5	38.4615

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