PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4951-5000 / 86044 show all
qzeng-customINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
94.4444
10200
qzeng-customINDELI16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
100.0000
95.0000
02100
qzeng-customINDELI16_PLUSmap_l150_m2_e0hetalt
0.0000
0.0000
100.0000
95.4545
02100
qzeng-customINDELI16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
100.0000
95.6522
02100
qzeng-customINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_sirenhetalt
76.9231
62.5000
100.0000
84.0909
106700
qzeng-customINDELI16_PLUSsegduphetalt
66.6667
50.0000
100.0000
98.7342
22100
qzeng-customINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
60.0000
20200
qzeng-customINDELI1_5decoyhet
0.0000
100.0000
00000
qzeng-customINDELI1_5decoyhetalt
0.0000
100.0000
00000
qzeng-customINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
0.0000
20100
qzeng-customINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
25.6098
119012200
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
85.7143
75.0000
100.0000
58.0247
63213400
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
92.8230
86.6071
100.0000
66.1202
97156200
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
93.8053
88.3333
100.0000
71.2121
5373800
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
25.1397
100.0000
45134000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
100.0000
80.0000
00100
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
96.5630
93.3544
100.0000
65.8940
2952141200
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
86.3636
76.0000
100.0000
78.9474
196400
qzeng-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
66.6667
50.0000
100.0000
75.0000
11400