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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 934 935 936 937 938 939 940 941 942 ... 1720 1721 » 46851-46900 / 86044 show all
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	*	73.9330	59.3156	98.1108	66.7086	780	535	779	15	10	66.6667
ndellapenna-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	74.2193	59.3086	99.1453	28.8754	4049	2778	3712	32	27	84.3750
ndellapenna-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	74.1810	59.3050	99.0185	33.0396	4847	3326	4439	44	37	84.0909
qzeng-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	74.4526	59.3023	100.0000	68.1818	51	35	42	0	0
egarrison-hhga	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	72.8872	59.3023	94.5455	73.4300	51	35	52	3	2	66.6667
anovak-vg	INDEL	I1_5	map_l100_m0_e0	*	58.1032	59.3002	56.9536	86.9940	322	221	344	260	177	68.0769
ckim-isaac	INDEL	I1_5	map_l250_m2_e0	*	74.4444	59.2920	100.0000	97.1108	67	46	67	0	0
ciseli-custom	INDEL	*	map_l125_m1_e0	homalt	66.8206	59.2896	76.5432	87.7564	434	298	434	133	104	78.1955
gduggal-bwaplat	SNP	ti	map_l150_m1_e0	het	74.1845	59.2724	99.1222	91.2737	7332	5038	7340	65	21	32.3077
ckim-isaac	SNP	tv	map_l125_m1_e0	het	74.2974	59.2633	99.5522	74.3164	6001	4125	6003	27	7	25.9259
gduggal-bwaplat	INDEL	D16_PLUS	map_l125_m1_e0	*	74.4186	59.2593	100.0000	97.0909	16	11	16	0	0
gduggal-bwaplat	INDEL	D16_PLUS	map_l125_m2_e0	*	74.4186	59.2593	100.0000	97.3597	16	11	16	0	0
eyeh-varpipe	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	het	46.2549	59.2593	37.9310	95.3895	16	11	11	18	0	0.0000
gduggal-bwafb	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	het	60.3774	59.2593	61.5385	97.8369	16	11	16	10	1	10.0000
anovak-vg	INDEL	I6_15	map_l150_m2_e1	*	60.6316	59.2593	62.0690	91.8310	16	11	18	11	3	27.2727
ltrigg-rtg2	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	het	68.0851	59.2593	80.0000	96.0239	16	11	16	4	1	25.0000
rpoplin-dv42	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	72.7273	59.2593	94.1176	90.7609	16	11	16	1	1	100.0000
qzeng-custom	SNP	ti	map_l250_m2_e1	homalt	74.0705	59.2551	98.7643	89.0815	1050	722	1039	13	12	92.3077
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	59.2455	0.0000	0.0000	2387	1642	0	0	0
mlin-fermikit	INDEL	D1_5	map_l125_m2_e0	*	70.4052	59.2301	86.7779	80.7464	677	466	676	103	90	87.3786
ckim-isaac	SNP	*	map_l150_m2_e1	het	74.2817	59.2251	99.6036	80.2344	12060	8303	12061	48	9	18.7500
gduggal-bwaplat	INDEL	I1_5	map_l150_m2_e0	het	74.2394	59.2233	99.4565	96.5348	183	126	183	1	0	0.0000
anovak-vg	INDEL	I1_5	map_l100_m1_e0	*	58.0113	59.2233	56.8479	83.7016	793	546	826	627	447	71.2919
ckim-isaac	SNP	*	map_l150_m2_e0	het	74.2562	59.1914	99.6072	80.1907	11917	8216	11918	47	8	17.0213
ckim-gatk	SNP	tv	map_l250_m2_e1	het	72.9840	59.1858	95.1718	96.8842	1163	802	1163	59	1	1.6949
mlin-fermikit	INDEL	D6_15	segdup	hetalt	74.3590	59.1837	100.0000	89.2193	29	20	29	0	0
qzeng-custom	INDEL	*	map_l250_m2_e0	homalt	73.1839	59.1304	96.0000	96.3262	68	47	96	4	1	25.0000
ghariani-varprowl	INDEL	D16_PLUS	*	*	61.7015	59.1244	64.5135	70.3568	4011	2773	4025	2214	2123	95.8898
eyeh-varpipe	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	63.9682	59.1207	69.6815	44.3739	8741	6044	8729	3798	3701	97.4460
mlin-fermikit	SNP	tv	map_l100_m2_e0	*	71.0756	59.1180	89.0970	57.6083	14799	10234	14791	1810	1594	88.0663
ndellapenna-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	74.0374	59.1106	99.0498	29.9414	4785	3310	4378	42	35	83.3333
jpowers-varprowl	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	55.1985	59.1093	51.7730	72.4878	146	101	146	136	136	100.0000
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	33.1178	59.0909	23.0058	50.3159	195	135	199	666	661	99.2492
gduggal-bwaplat	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	73.8416	59.0909	98.4064	66.3539	247	171	247	4	0	0.0000
gduggal-bwafb	INDEL	*	map_l100_m2_e1	hetalt	73.5849	59.0909	97.5000	93.2660	78	54	39	1	1	100.0000
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	65.0000	59.0909	72.2222	68.4211	13	9	13	5	5	100.0000
qzeng-custom	INDEL	D6_15	map_l250_m2_e0	*	66.1017	59.0909	75.0000	98.0276	13	9	15	5	2	40.0000
qzeng-custom	INDEL	D6_15	map_l250_m2_e1	*	66.1017	59.0909	75.0000	98.0658	13	9	15	5	2	40.0000
gduggal-snapvard	INDEL	D6_15	map_l250_m2_e0	*	57.8534	59.0909	56.6667	94.8980	13	9	17	13	7	53.8462
gduggal-snapvard	INDEL	D6_15	map_l250_m2_e1	*	58.5732	59.0909	58.0645	94.8845	13	9	18	13	7	53.8462
gduggal-snapfb	INDEL	I6_15	map_l100_m1_e0	hetalt	66.1017	59.0909	75.0000	72.4138	13	9	6	2	2	100.0000
gduggal-snapfb	INDEL	I6_15	map_l100_m2_e0	hetalt	66.1017	59.0909	75.0000	72.4138	13	9	6	2	2	100.0000
gduggal-snapfb	INDEL	I6_15	map_l100_m2_e1	hetalt	66.1017	59.0909	75.0000	72.4138	13	9	6	2	2	100.0000
ciseli-custom	INDEL	*	map_l150_m2_e1	*	65.3436	59.0688	73.1100	93.1469	850	589	851	313	195	62.3003
gduggal-bwavard	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	60.8792	59.0648	62.8085	52.6630	21613	14979	21581	12779	12331	96.4942
ciseli-custom	SNP	ti	map_l250_m1_e0	het	63.3134	59.0633	68.2225	93.3005	1753	1215	1754	817	20	2.4480
gduggal-bwaplat	SNP	tv	map_l125_m2_e1	*	74.1036	59.0623	99.4240	88.9166	9838	6819	9838	57	13	22.8070
qzeng-custom	SNP	ti	map_l250_m2_e0	homalt	73.9407	59.0623	98.8395	89.1089	1033	716	1022	12	11	91.6667
gduggal-bwafb	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	74.2610	59.0596	100.0000	28.0702	515	357	123	0	0
qzeng-custom	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	65.9107	59.0529	74.5704	50.3413	212	147	217	74	67	90.5405

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