PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
37451-37500 / 86044 show all
ltrigg-rtg2SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
90.8215
86.6667
95.3947
86.7596
1432214570
0.0000
raldana-dualsentieonINDELI16_PLUSmap_l125_m1_e0*
92.8571
86.6667
100.0000
93.9815
1321300
raldana-dualsentieonINDELI16_PLUSmap_l125_m2_e0*
89.6552
86.6667
92.8571
94.6970
1321310
0.0000
raldana-dualsentieonINDELI16_PLUSmap_l125_m2_e1*
89.6552
86.6667
92.8571
94.7170
1321310
0.0000
raldana-dualsentieonINDELI6_15map_l125_m1_e0homalt
86.6667
86.6667
86.6667
90.0662
1321320
0.0000
raldana-dualsentieonINDELI6_15map_l125_m2_e0homalt
86.6667
86.6667
86.6667
91.1765
1321320
0.0000
raldana-dualsentieonINDELI6_15map_l125_m2_e1homalt
86.6667
86.6667
86.6667
91.5254
1321320
0.0000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
51.4512
86.6667
36.5854
95.2982
13215262
7.6923
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
49.0937
86.6667
34.2466
60.9626
13225481
2.0833
mlin-fermikitINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
68.4211
86.6667
56.5217
98.1437
132131010
100.0000
ndellapenna-hhgaSNPtimap_l100_m2_e0hetalt
91.2281
86.6667
96.2963
79.0698
2642611
100.0000
ndellapenna-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
90.5063
86.6667
94.7020
88.3308
1432214386
75.0000
raldana-dualsentieonINDELD1_5map_l125_m2_e0hetalt
92.8571
86.6667
100.0000
94.7791
1321300
raldana-dualsentieonINDELD1_5map_l125_m2_e1hetalt
92.8571
86.6667
100.0000
94.9219
1321300
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
92.8571
86.6667
100.0000
96.9412
1321300
rpoplin-dv42INDELD16_PLUSmap_l100_m1_e0homalt
86.6667
86.6667
86.6667
91.3295
1321321
50.0000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
86.6667
100.0000
84.7059
1321300
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
81.2500
86.6667
76.4706
96.7803
1321344
100.0000
rpoplin-dv42INDELI6_15map_l125_m1_e0homalt
92.8571
86.6667
100.0000
91.0959
1321300
rpoplin-dv42INDELI6_15map_l125_m2_e0homalt
92.8571
86.6667
100.0000
92.0732
1321300
rpoplin-dv42INDELI6_15map_l125_m2_e1homalt
92.8571
86.6667
100.0000
92.3977
1321300
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
58.1470
86.6667
43.7500
77.4648
132141817
94.4444
gduggal-snapvardINDELI1_5map_l250_m0_e0het
70.5302
86.6667
59.4595
98.2596
13222153
20.0000
gduggal-snapvardINDELI6_15map_l125_m1_e0het
65.6975
86.6667
52.8986
82.1244
264736550
76.9231
gduggal-snapvardINDELI6_15map_l125_m2_e0het
66.1017
86.6667
53.4247
82.5150
264786853
77.9412
gduggal-snapvardINDELI6_15map_l125_m2_e1het
66.1017
86.6667
53.4247
82.9240
264786853
77.9412
gduggal-snapfbINDELI1_5map_l250_m1_e0het
89.6552
86.6667
92.8571
95.7831
5285241
25.0000
gduggal-snapplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
86.6667
86.6667
86.6667
95.8564
1321321
50.0000
gduggal-snapplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
86.6667
86.6667
86.6667
95.8564
1321321
50.0000
gduggal-snapplatSNPtimap_l150_m1_e0hetalt
81.2500
86.6667
76.4706
83.4951
1321344
100.0000
gduggal-snapplatSNPtimap_l150_m2_e0hetalt
81.2500
86.6667
76.4706
85.8333
1321344
100.0000
gduggal-snapplatSNPtimap_l150_m2_e1hetalt
81.2500
86.6667
76.4706
85.8333
1321344
100.0000
gduggal-snapplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
86.6667
86.6667
86.6667
95.8564
1321321
50.0000
gduggal-snapplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
86.6667
86.6667
86.6667
95.8564
1321321
50.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e0*
87.1508
86.6667
87.6404
95.9118
781278113
27.2727
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
86.6667
100.0000
89.3443
1321300
asubramanian-gatkINDELI16_PLUSmap_l125_m1_e0*
86.6667
86.6667
86.6667
96.4455
1321320
0.0000
asubramanian-gatkINDELI16_PLUSmap_l125_m2_e0*
86.6667
86.6667
86.6667
96.9450
1321320
0.0000
asubramanian-gatkINDELI16_PLUSmap_l125_m2_e1*
86.6667
86.6667
86.6667
96.9512
1321320
0.0000
astatham-gatkINDELI16_PLUSmap_l125_m1_e0*
86.6667
86.6667
86.6667
96.6960
1321320
0.0000
astatham-gatkINDELI16_PLUSmap_l125_m2_e0*
83.8710
86.6667
81.2500
96.8872
1321330
0.0000
astatham-gatkINDELI16_PLUSmap_l125_m2_e1*
83.8710
86.6667
81.2500
96.8932
1321330
0.0000
astatham-gatkINDELI1_5map_l250_m0_e0het
92.8571
86.6667
100.0000
98.5507
1321300
astatham-gatkINDELI6_15map_l150_m1_e0het
89.6552
86.6667
92.8571
95.4248
1321311
100.0000
astatham-gatkINDELI6_15map_l150_m2_e0het
89.6552
86.6667
92.8571
95.8333
1321311
100.0000
bgallagher-sentieonINDELI6_15map_l150_m1_e0het
89.6552
86.6667
92.8571
95.2703
1321311
100.0000
bgallagher-sentieonINDELI6_15map_l150_m2_e0het
89.6552
86.6667
92.8571
95.7187
1321311
100.0000
anovak-vgINDELI6_15map_l125_m1_e0homalt
78.7879
86.6667
72.2222
87.0504
1321354
80.0000
anovak-vgINDELI6_15map_l125_m2_e0homalt
78.7879
86.6667
72.2222
89.0244
1321354
80.0000
anovak-vgINDELI6_15map_l125_m2_e1homalt
78.7879
86.6667
72.2222
89.3491
1321354
80.0000