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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 704 705 706 707 708 709 710 711 712 ... 1720 1721 » 35351-35400 / 86044 show all
ckim-isaac	INDEL	*	tech_badpromoters	het	94.5946	89.7436	100.0000	48.4375	35	4	33	0	0
gduggal-bwafb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	93.8831	89.7436	98.4229	41.9180	3990	456	10235	164	145	88.4146
mlin-fermikit	INDEL	*	tech_badpromoters	het	93.3333	89.7436	97.2222	44.6154	35	4	35	1	1	100.0000
raldana-dualsentieon	INDEL	*	tech_badpromoters	het	94.5946	89.7436	100.0000	50.7042	35	4	35	0	0
hfeng-pmm3	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.8671	89.7394	98.3929	66.3731	1653	189	1653	27	15	55.5556
mlin-fermikit	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	88.0789	89.7382	86.4799	86.3258	2125	243	2130	333	219	65.7658
jpowers-varprowl	INDEL	*	map_l100_m2_e0	*	91.3432	89.7373	93.0076	85.5055	3314	379	3312	249	199	79.9197
asubramanian-gatk	INDEL	D1_5	map_l100_m2_e1	*	93.0516	89.7370	96.6205	87.5894	1740	199	1744	61	7	11.4754
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	92.6629	89.7351	95.7882	48.3290	28184	3224	28110	1236	977	79.0453
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	92.6629	89.7351	95.7882	48.3290	28184	3224	28110	1236	977	79.0453
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	92.3529	89.7315	95.1320	41.7997	2473	283	2775	142	134	94.3662
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	91.5169	89.7281	93.3784	46.7817	1485	170	1382	98	58	59.1837
anovak-vg	SNP	ti	map_l150_m2_e0	het	75.9641	89.7213	65.8649	81.6317	11557	1324	11473	5946	1327	22.3175
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	90.6827	89.7196	91.6667	60.0255	2880	330	2871	261	260	99.6169
gduggal-snapplat	SNP	ti	map_l125_m1_e0	homalt	94.5380	89.7148	99.9092	66.4158	9909	1136	9898	9	9	100.0000
rpoplin-dv42	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	94.5783	89.7143	100.0000	60.7407	157	18	159	0	0
ltrigg-rtg1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	93.7178	89.7143	98.0952	43.4470	314	36	309	6	6	100.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	89.7143	0.0000	0.0000	314	36	0	0	0
asubramanian-gatk	INDEL	D1_5	map_l100_m2_e0	*	93.0444	89.7128	96.6330	87.5446	1718	197	1722	60	7	11.6667
qzeng-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	92.6329	89.7120	95.7505	61.0009	14423	1654	21721	964	836	86.7220
qzeng-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	92.6329	89.7120	95.7505	61.0009	14423	1654	21721	964	836	86.7220
astatham-gatk	INDEL	I1_5	map_l125_m1_e0	het	93.9683	89.7119	98.6486	88.3311	436	50	438	6	0	0.0000
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	93.3110	89.7106	97.2125	69.4681	279	32	279	8	8	100.0000
jpowers-varprowl	INDEL	*	map_l100_m1_e0	*	91.2993	89.7100	92.9459	84.6574	3217	369	3215	244	196	80.3279
gduggal-bwaplat	INDEL	D1_5	*	het	94.1987	89.7070	99.1640	66.4739	78560	9014	78527	662	219	33.0816
hfeng-pmm3	INDEL	D6_15	map_l100_m1_e0	hetalt	94.5736	89.7059	100.0000	71.7593	61	7	61	0	0
hfeng-pmm3	INDEL	D6_15	map_l100_m2_e0	hetalt	94.5736	89.7059	100.0000	73.5931	61	7	61	0	0
ndellapenna-hhga	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	93.8462	89.7059	98.3871	69.0000	61	7	61	1	0	0.0000
raldana-dualsentieon	INDEL	D6_15	map_l100_m1_e0	hetalt	94.5736	89.7059	100.0000	66.6667	61	7	61	0	0
raldana-dualsentieon	INDEL	D6_15	map_l100_m2_e0	hetalt	94.5736	89.7059	100.0000	68.5567	61	7	61	0	0
hfeng-pmm2	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.2754	89.6920	97.1571	51.8026	3524	405	3520	103	96	93.2039
hfeng-pmm3	INDEL	D16_PLUS	map_l100_m2_e1	*	90.1554	89.6907	90.6250	93.3194	87	10	87	9	2	22.2222
raldana-dualsentieon	INDEL	D16_PLUS	map_l100_m2_e1	*	89.2308	89.6907	88.7755	92.8467	87	10	87	11	4	36.3636
asubramanian-gatk	INDEL	*	map_l150_m0_e0	*	90.5945	89.6887	91.5187	98.1956	461	53	464	43	3	6.9767
hfeng-pmm1	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.7305	89.6851	98.1581	66.4808	1652	190	1652	31	17	54.8387
anovak-vg	INDEL	*	map_siren	homalt	77.1234	89.6798	67.6512	75.5300	2381	274	2405	1150	1080	93.9130
asubramanian-gatk	INDEL	D1_5	map_l100_m0_e0	het	91.2220	89.6785	92.8196	89.5670	530	61	530	41	4	9.7561
qzeng-custom	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	62.0163	89.6774	47.3968	67.2160	139	16	264	293	16	5.4608
ltrigg-rtg2	SNP	tv	map_l250_m0_e0	*	94.4251	89.6732	99.7089	83.7895	686	79	685	2	0	0.0000
gduggal-bwavard	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	83.9654	89.6725	78.9413	89.5816	712	82	686	183	64	34.9727
gduggal-snapvard	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	79.4795	89.6706	71.3684	71.4189	43284	4986	93686	37585	31016	82.5223
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	94.0716	89.6700	98.9276	37.7295	625	72	738	8	8	100.0000
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	94.4317	89.6700	99.7275	38.3193	625	72	732	2	2	100.0000
jli-custom	INDEL	D16_PLUS	map_l100_m1_e0	*	91.2281	89.6552	92.8571	92.4866	78	9	78	6	2	33.3333
ghariani-varprowl	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	73.6289	89.6552	62.4633	66.7479	416	48	426	256	253	98.8281
raldana-dualsentieon	INDEL	D16_PLUS	map_l100_m1_e0	*	88.6364	89.6552	87.6404	92.1793	78	9	78	11	4	36.3636
rpoplin-dv42	INDEL	I6_15	map_l100_m2_e0	*	93.2735	89.6552	97.1963	85.5014	104	12	104	3	2	66.6667
rpoplin-dv42	INDEL	I6_15	map_l100_m2_e1	*	93.2735	89.6552	97.1963	85.8466	104	12	104	3	2	66.6667
qzeng-custom	INDEL	D6_15	func_cds	het	85.5576	89.6552	81.8182	50.0000	26	3	27	6	0	0.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.4132	89.6552	97.5000	85.2399	78	9	78	2	2	100.0000

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