PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
2451-2500 / 86044 show all
gduggal-bwaplatINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.8073
10100
gduggal-bwaplatINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9425
10100
gduggal-bwaplatINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7500
10100
gduggal-bwaplatINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.5294
10100
gduggal-bwaplatINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
64.8649
1301300
gduggal-bwaplatINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9958
10100
gduggal-bwaplatINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9943
10100
gduggal-bwaplatINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9649
10100
gduggal-bwaplatINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.3789
10100
gduggal-bwaplatINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwaplatINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
85.7143
100.0000
75.0000
98.6111
30310
0.0000
gduggal-bwaplatINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.2456
10100
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
98.8806
20210
0.0000
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
94.4444
20200
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
95.2381
10100
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
85.7143
10100
gduggal-bwaplatINDELI16_PLUSHG002compoundhethomalt
10.3448
100.0000
5.4545
83.2317
3035249
94.2308
gduggal-bwaplatINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
75.0000
20200
gduggal-bwaplatINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9532
10100
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7342
10100
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9514
10100
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.6301
10100
gduggal-bwaplatINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
75.7576
80800
gduggal-bwaplatINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
75.0000
10100
gduggal-bwaplatINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.8571
10100
gduggal-bwaplatINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
94.0000
30300
gduggal-bwaplatINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.0000
30300
gduggal-bwaplatINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.1613
30300
gduggal-bwaplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
10100
gduggal-bwaplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
gduggal-bwaplatSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.2727
50500
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
86.6667
20200
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
80.0000
10100
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.3333
10100
eyeh-varpipeINDELD6_15map_l150_m0_e0het
100.0000
100.0000
100.0000
92.4138
2002200
eyeh-varpipeINDELD6_15map_l150_m0_e0homalt
83.3333
100.0000
71.4286
93.9130
701044
100.0000
eyeh-varpipeINDELD6_15map_l150_m1_e0het
95.4545
100.0000
91.3043
89.6163
3904244
100.0000
eyeh-varpipeINDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
97.1787
60900
eyeh-varpipeINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
96.7532
40500
eyeh-varpipeINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.2603
20400
eyeh-varpipeINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
95.2000
1101200
eyeh-varpipeINDELD6_15map_l250_m1_e0homalt
94.1176
100.0000
88.8889
95.9821
50811
100.0000
eyeh-varpipeINDELD6_15map_l250_m2_e0het
96.7742
100.0000
93.7500
94.3662
1401511
100.0000
eyeh-varpipeINDELD6_15map_l250_m2_e1het
96.7742
100.0000
93.7500
94.4828
1401511
100.0000
eyeh-varpipeINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.3333
60700
eyeh-varpipeINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
60.0000
20200
eyeh-varpipeINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
88.8889
10100
eyeh-varpipeINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
62.5000
20300
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
86.7925
100.0000
76.6667
97.8198
102375
71.4286