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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 383 384 385 386 387 388 389 390 391 ... 1720 1721 » 19301-19350 / 86044 show all
jlack-gatk	SNP	tv	map_l100_m0_e0	homalt	99.0571	98.3359	99.7889	62.7592	3782	64	3782	8	5	62.5000
anovak-vg	SNP	*	*	*	98.4545	98.3357	98.5736	21.3437	3003796	50838	2987348	43227	18700	43.2600
ltrigg-rtg1	INDEL	*	*	*	99.0160	98.3355	99.7061	56.0561	338806	5735	338554	998	454	45.4910
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.1543	98.3354	97.9739	68.1869	13528	229	13491	279	216	77.4194
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.1543	98.3354	97.9739	68.1869	13528	229	13491	279	216	77.4194
astatham-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0091	98.3346	99.6930	62.0890	1299	22	1299	4	3	75.0000
asubramanian-gatk	INDEL	I1_5	HG002complexvar	het	99.1051	98.3342	99.8882	58.4164	17886	303	17868	20	13	65.0000
asubramanian-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.3470	98.3333	98.3607	87.6954	708	12	720	12	6	50.0000
bgallagher-sentieon	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	94.6895	59	1	59	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	94.8381	59	1	59	0	0
bgallagher-sentieon	INDEL	D6_15	map_l100_m0_e0	het	95.1613	98.3333	92.1875	91.1234	59	1	59	5	1	20.0000
astatham-gatk	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	94.7788	59	1	59	0	0
astatham-gatk	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	94.9225	59	1	59	0	0
astatham-gatk	INDEL	D6_15	map_l100_m0_e0	het	95.1613	98.3333	92.1875	91.2449	59	1	59	5	1	20.0000
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	81.3880	59	1	59	0	0
bgallagher-sentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	80.5281	59	1	59	0	0
ckim-dragen	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	80.9677	59	1	59	0	0
ckim-gatk	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	95.0669	59	1	59	0	0
ckim-gatk	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	95.1915	59	1	59	0	0
ckim-gatk	INDEL	D6_15	map_l100_m0_e0	het	92.9134	98.3333	88.0597	92.8875	59	1	59	8	1	12.5000
gduggal-snapfb	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	96.7367	59	1	59	0	0
gduggal-snapfb	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	96.8074	59	1	59	0	0
gduggal-bwafb	INDEL	I1_5	func_cds	*	98.6072	98.3333	98.8827	35.1449	177	3	177	2	1	50.0000
ghariani-varprowl	INDEL	D6_15	map_l100_m0_e0	het	82.5175	98.3333	71.0843	91.9024	59	1	59	24	21	87.5000
ghariani-varprowl	INDEL	I1_5	map_l250_m1_e0	het	90.7692	98.3333	84.2857	97.7827	59	1	59	11	3	27.2727
hfeng-pmm1	INDEL	D6_15	map_l100_m0_e0	het	96.7213	98.3333	95.1613	86.8085	59	1	59	3	1	33.3333
ndellapenna-hhga	INDEL	D6_15	map_l100_m0_e0	het	94.9442	98.3333	91.7808	88.6997	59	1	67	6	0	0.0000
ndellapenna-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	78.3883	59	1	59	0	0
rpoplin-dv42	INDEL	D6_15	map_l100_m0_e0	het	95.1613	98.3333	92.1875	89.6272	59	1	59	5	1	20.0000
raldana-dualsentieon	INDEL	D6_15	map_l100_m0_e0	het	97.5207	98.3333	96.7213	87.5000	59	1	59	2	0	0.0000
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	80.0676	59	1	59	0	0
jlack-gatk	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	94.2774	59	1	59	0	0
jlack-gatk	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	94.4497	59	1	59	0	0
jli-custom	INDEL	D6_15	map_l100_m0_e0	het	95.9350	98.3333	93.6508	88.2022	59	1	59	4	1	25.0000
hfeng-pmm3	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	93.2262	59	1	59	0	0
hfeng-pmm3	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	93.4004	59	1	59	0	0
hfeng-pmm3	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	80.7818	59	1	59	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	81.5047	59	1	59	0	0
hfeng-pmm2	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	94.0524	59	1	59	0	0
hfeng-pmm2	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	94.2326	59	1	59	0	0
hfeng-pmm2	INDEL	D6_15	map_l100_m0_e0	het	95.9350	98.3333	93.6508	89.9200	59	1	59	4	1	25.0000
egarrison-hhga	INDEL	D6_15	map_l100_m0_e0	het	96.2238	98.3333	94.2029	88.3051	59	1	65	4	1	25.0000
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	98.3333	98.3333	98.3333	77.7778	59	1	59	1	1	100.0000
ckim-vqsr	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	95.0669	59	1	59	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	95.1915	59	1	59	0	0
ckim-vqsr	INDEL	D6_15	map_l100_m0_e0	het	94.4000	98.3333	90.7692	93.0851	59	1	59	6	1	16.6667
dgrover-gatk	INDEL	D6_15	map_l100_m0_e0	het	95.9350	98.3333	93.6508	91.5323	59	1	59	4	1	25.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	81.5047	59	1	59	0	0
eyeh-varpipe	INDEL	D1_5	map_l250_m2_e0	homalt	97.4929	98.3333	96.6667	95.1561	59	1	87	3	3	100.0000
eyeh-varpipe	INDEL	D1_5	map_l250_m2_e1	homalt	97.5297	98.3333	96.7391	95.1933	59	1	89	3	3	100.0000

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