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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 287 288 289 290 291 292 293 294 295 ... 1720 1721 » 14501-14550 / 86044 show all
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.8066	99.2505	98.3666	68.3281	3840	29	3794	63	61	96.8254
hfeng-pmm2	SNP	ti	map_l125_m1_e0	het	99.1603	99.2500	99.0708	74.2780	18129	137	18125	170	14	8.2353
rpoplin-dv42	INDEL	*	*	homalt	99.5190	99.2498	99.7896	55.3247	124233	939	124240	262	239	91.2214
ltrigg-rtg1	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.5721	99.2498	99.8965	56.0085	28048	212	27998	29	16	55.1724
bgallagher-sentieon	INDEL	*	segdup	het	98.8787	99.2497	98.5105	95.1038	1455	11	1455	22	2	9.0909
gduggal-snapfb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	97.2641	99.2497	95.3564	60.4398	1455	11	1458	71	8	11.2676
dgrover-gatk	INDEL	*	segdup	het	99.0133	99.2497	98.7780	95.2951	1455	11	1455	18	2	11.1111
bgallagher-sentieon	SNP	*	map_l150_m1_e0	het	98.7760	99.2493	98.3073	78.6499	19171	145	19165	330	49	14.8485
bgallagher-sentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3181	99.2492	99.3870	72.2871	1322	10	1297	8	6	75.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3559	99.2492	99.4628	72.8768	1322	10	1296	7	5	71.4286
dgrover-gatk	SNP	ti	map_l100_m0_e0	het	99.1285	99.2491	99.0081	74.4536	13878	105	13875	139	28	20.1439
cchapple-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	98.8761	99.2488	98.5061	62.8641	1057	8	1055	16	16	100.0000
ckim-dragen	SNP	ti	map_l100_m1_e0	het	98.1230	99.2485	97.0227	71.3768	29717	225	29720	912	87	9.5395
egarrison-hhga	SNP	*	map_l100_m2_e0	*	99.5430	99.2483	99.8395	64.7214	73408	556	73409	118	50	42.3729
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.4350	99.2481	99.6226	83.0346	264	2	264	1	1	100.0000
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.2481	99.2481	99.2481	82.9814	264	2	264	2	1	50.0000
asubramanian-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.4357	99.2481	99.6241	82.5115	264	2	265	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.0619	99.2481	98.8764	82.8296	264	2	264	3	1	33.3333
ltrigg-rtg2	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.2394	99.2481	99.2308	79.1667	264	2	258	2	1	50.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.6226	99.2481	100.0000	62.3932	396	3	396	0	0
gduggal-snapfb	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	96.4947	99.2475	93.8904	70.4163	20047	152	20055	1305	194	14.8659
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.3409	99.2474	99.4345	80.6493	1055	8	1055	6	6	100.0000
ciseli-custom	SNP	tv	func_cds	het	92.8964	99.2473	87.3095	32.0576	2637	20	2635	383	2	0.5222
rpoplin-dv42	SNP	*	map_l125_m2_e1	homalt	99.5110	99.2471	99.7764	69.2363	17400	132	17400	39	38	97.4359
asubramanian-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	97.3524	99.2470	95.5288	54.1878	8303	63	8888	416	317	76.2019
bgallagher-sentieon	SNP	ti	map_l150_m2_e1	het	98.8973	99.2470	98.5500	79.7478	12917	98	12913	190	30	15.7895
hfeng-pmm2	SNP	*	map_l125_m0_e0	*	99.0092	99.2468	98.7728	76.6565	19239	146	19236	239	30	12.5523
hfeng-pmm3	SNP	*	map_l125_m0_e0	*	99.2955	99.2468	99.3441	74.5016	19239	146	19236	127	18	14.1732
jlack-gatk	INDEL	I1_5	map_l100_m2_e0	homalt	99.1533	99.2467	99.0602	82.1116	527	4	527	5	3	60.0000
raldana-dualsentieon	INDEL	I1_5	map_l100_m2_e0	homalt	99.3402	99.2467	99.4340	80.8110	527	4	527	3	2	66.6667
egarrison-hhga	INDEL	I1_5	map_l100_m2_e0	homalt	99.1533	99.2467	99.0602	83.0249	527	4	527	5	2	40.0000
dgrover-gatk	SNP	ti	map_l100_m0_e0	*	99.2854	99.2467	99.3242	70.6721	21607	164	21604	147	34	23.1293
gduggal-snapfb	INDEL	I1_5	map_l100_m2_e0	homalt	98.6891	99.2467	98.1378	87.1161	527	4	527	10	4	40.0000
ndellapenna-hhga	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.5204	99.2464	99.7960	35.7063	3424	26	3425	7	4	57.1429
jmaeng-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.3974	99.2449	99.5503	79.5805	4206	32	4206	19	5	26.3158
ckim-dragen	INDEL	I1_5	segdup	*	97.2226	99.2446	95.2813	95.0536	1051	8	1050	52	5	9.6154
rpoplin-dv42	SNP	tv	map_l100_m2_e1	*	99.2936	99.2446	99.3427	66.1225	25092	191	25088	166	80	48.1928
dgrover-gatk	INDEL	I1_5	segdup	*	99.2921	99.2446	99.3396	94.6513	1051	8	1053	7	2	28.5714
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3069	99.2443	99.3695	89.2982	788	6	788	5	5	100.0000
ltrigg-rtg2	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3589	99.2443	99.4737	85.1185	788	6	756	4	0	0.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.4322	99.2443	99.6207	88.9340	788	6	788	3	3	100.0000
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.2626	99.2439	99.2814	84.2685	2625	20	2625	19	7	36.8421
hfeng-pmm2	SNP	tv	map_l125_m2_e0	het	99.0157	99.2434	98.7891	75.7772	10363	79	10361	127	11	8.6614
qzeng-custom	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.7057	99.2433	98.1739	67.8653	35151	268	35268	656	60	9.1463
qzeng-custom	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.4978	99.2429	99.7541	54.5635	25167	192	25148	62	34	54.8387
jlack-gatk	SNP	ti	map_l100_m2_e0	het	96.4036	99.2424	93.7226	78.7202	30390	232	30383	2035	176	8.6487
ltrigg-rtg2	SNP	*	map_l150_m0_e0	homalt	99.5584	99.2419	99.8769	71.8698	4058	31	4057	5	4	80.0000
asubramanian-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5679	99.2416	99.8964	30.1737	916	7	964	1	1	100.0000
bgallagher-sentieon	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5654	99.2416	99.8913	28.9575	916	7	919	1	1	100.0000
ckim-dragen	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.2927	99.2413	99.3442	65.4836	12426	95	12270	81	75	92.5926

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