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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 253 254 255 256 257 258 259 260 261 ... 1720 1721 » 12801-12850 / 86044 show all
hfeng-pmm3	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	55.7047	196	1	196	2	2	100.0000
jlack-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.7556	99.4924	96.0784	58.9537	196	1	196	8	8	100.0000
jli-custom	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	56.9565	196	1	196	2	2	100.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	50.1159	99.4924	33.4936	34.9322	196	1	209	415	385	92.7711
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.4924	99.4924	99.4924	60.6000	196	1	196	1	1	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	60.4000	196	1	196	2	1	50.0000
gduggal-bwafb	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.6007	99.4924	99.7093	41.1337	2744	14	2744	8	5	62.5000
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	99.2405	99.4924	98.9899	60.4000	196	1	196	2	1	50.0000
ltrigg-rtg2	SNP	ti	map_l250_m2_e1	homalt	99.6608	99.4921	99.8301	85.6923	1763	9	1763	3	3	100.0000
gduggal-bwafb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	94.7163	99.4919	90.3781	51.0003	5091	26	5091	542	540	99.6310
ltrigg-rtg2	SNP	*	segdup	het	98.7596	99.4918	98.0380	86.6405	17229	88	17239	345	3	0.8696
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5315	99.4915	99.5716	59.7014	19761	101	19754	85	47	55.2941
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.6180	99.4911	99.7452	67.3461	782	4	783	2	0	0.0000
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7119	99.4908	99.9340	54.5993	6057	31	6057	4	4	100.0000
cchapple-custom	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7161	99.4907	99.9426	43.6105	1758	9	1742	1	1	100.0000
eyeh-varpipe	SNP	ti	map_l150_m1_e0	het	98.7761	99.4907	98.0716	79.3788	12307	63	12053	237	11	4.6414
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7164	99.4907	99.9431	60.9458	1758	9	1758	1	1	100.0000
jlack-gatk	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.6881	99.4907	99.8864	60.3693	1758	9	1758	2	2	100.0000
hfeng-pmm1	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7164	99.4907	99.9431	61.2384	1758	9	1758	1	1	100.0000
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6719	99.4905	99.8540	71.6062	1367	7	1368	2	0	0.0000
hfeng-pmm3	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6719	99.4905	99.8540	71.2728	1367	7	1368	2	0	0.0000
hfeng-pmm2	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6719	99.4905	99.8540	71.8223	1367	7	1368	2	0	0.0000
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6719	99.4905	99.8539	72.1465	1367	7	1367	2	0	0.0000
ckim-vqsr	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7083	99.4905	99.9270	74.1698	1367	7	1368	1	0	0.0000
bgallagher-sentieon	INDEL	D1_5	map_siren	*	99.2660	99.4899	99.0431	81.6382	3511	18	3519	34	6	17.6471
bgallagher-sentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.3771	99.4898	99.2647	88.8454	1755	9	1755	13	11	84.6154
raldana-dualsentieon	SNP	tv	map_l100_m2_e1	*	99.4052	99.4898	99.3207	66.9624	25154	129	25150	172	5	2.9070
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.3490	99.4898	99.2086	89.1572	1755	9	1755	14	13	92.8571
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742
asubramanian-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.9716	99.4894	98.4590	36.7681	7210	37	7220	113	103	91.1504
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.6620	99.4893	95.9007	73.2635	11493	59	11510	492	263	53.4553
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.6620	99.4893	95.9007	73.2635	11493	59	11510	492	263	53.4553
jlack-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7223	99.4893	99.9565	63.3985	11493	59	11493	5	5	100.0000
jlack-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.3251	99.4893	99.1616	77.5985	6623	34	6623	56	11	19.6429
jlack-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7223	99.4893	99.9565	63.3985	11493	59	11493	5	5	100.0000
hfeng-pmm3	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.7311	99.4891	99.9743	79.8583	3895	20	3895	1	0	0.0000
qzeng-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.3593	99.4891	99.2298	79.0524	3895	20	3865	30	20	66.6667
egarrison-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5478	99.4890	99.6066	49.0683	2531	13	2532	10	2	20.0000
rpoplin-dv42	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7438	99.4888	100.0000	45.1051	2141	11	2142	0	0
gduggal-bwavard	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	97.3750	99.4887	95.3492	61.3437	16345	84	16381	799	639	79.9750
jmaeng-gatk	INDEL	*	*	het	99.3015	99.4880	99.1156	62.5254	193139	994	192770	1720	614	35.6977
ltrigg-rtg2	SNP	ti	map_l150_m2_e0	homalt	99.7039	99.4879	99.9209	70.3819	7577	39	7578	6	6	100.0000
raldana-dualsentieon	SNP	ti	map_l150_m2_e0	homalt	99.6974	99.4879	99.9077	69.7016	7577	39	7577	7	6	85.7143
bgallagher-sentieon	SNP	*	map_l150_m2_e0	homalt	99.6746	99.4871	99.8627	70.7014	11639	60	11639	16	12	75.0000
jli-custom	SNP	*	map_l150_m2_e0	homalt	99.7002	99.4871	99.9142	70.0015	11639	60	11639	10	10	100.0000
ckim-vqsr	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6915	99.4869	99.8970	58.9754	28115	145	28118	29	17	58.6207
eyeh-varpipe	SNP	*	map_l250_m2_e1	*	98.9222	99.4867	98.3642	90.6150	7946	41	7757	129	12	9.3023
ckim-dragen	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.5956	99.4864	99.7050	76.9975	1356	7	1352	4	2	50.0000
egarrison-hhga	SNP	*	map_l150_m0_e0	homalt	99.6815	99.4864	99.8772	74.1921	4068	21	4068	5	5	100.0000

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