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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 247 248 249 250 251 252 253 254 255 ... 1720 1721 » 12501-12550 / 86044 show all
dgrover-gatk	SNP	tv	map_l100_m2_e0	het	99.3042	99.5246	99.0848	72.9235	15702	75	15698	145	24	16.5517
jli-custom	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.6490	99.5246	99.7737	73.4430	33078	158	33071	75	56	74.6667
astatham-gatk	SNP	tv	map_siren	homalt	99.7239	99.5244	99.9243	52.7924	17158	82	17155	13	10	76.9231
dgrover-gatk	SNP	ti	map_l100_m2_e1	homalt	99.7264	99.5242	99.9294	59.8793	18406	88	18406	13	11	84.6154
raldana-dualsentieon	SNP	ti	map_l100_m0_e0	homalt	99.7165	99.5241	99.9096	57.9975	7737	37	7737	7	6	85.7143
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.5712	99.5238	99.6187	62.3069	1045	5	1045	4	4	100.0000
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.6188	99.5238	99.7140	62.1846	1045	5	1046	3	3	100.0000
ltrigg-rtg2	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7486	99.5235	99.9748	31.2218	3968	19	3962	1	0	0.0000
jli-custom	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	99.6720	99.5235	99.8208	51.0416	6684	32	6686	12	5	41.6667
qzeng-custom	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6831	99.5234	99.8433	60.8736	10859	52	10830	17	7	41.1765
egarrison-hhga	SNP	*	map_l125_m0_e0	homalt	99.7164	99.5232	99.9103	68.4370	6680	32	6680	6	6	100.0000
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5583	99.5229	99.5937	62.9090	11055	53	11030	45	18	40.0000
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.0066	99.5228	94.6144	77.5514	16894	81	16918	963	436	45.2752
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.0066	99.5228	94.6144	77.5514	16894	81	16918	963	436	45.2752
rpoplin-dv42	SNP	ti	map_siren	*	99.6562	99.5227	99.7902	53.3616	99876	479	99868	210	138	65.7143
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7607	99.5225	100.0000	46.7518	1459	7	1459	0	0
ltrigg-rtg2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7607	99.5225	100.0000	43.1975	1459	7	1478	0	0
asubramanian-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7607	99.5225	100.0000	43.1189	1459	7	1459	0	0
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4894	99.5224	99.4565	52.2754	6043	29	6039	33	33	100.0000
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6632	99.5223	99.8044	57.7539	28125	135	28578	56	39	69.6429
hfeng-pmm2	SNP	ti	map_siren	het	99.5502	99.5223	99.5781	56.1068	62084	298	62075	263	19	7.2243
gduggal-bwafb	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.4793	99.5219	97.4583	69.5878	17484	84	17523	457	79	17.2867
hfeng-pmm2	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7378	99.5218	99.9547	55.5264	11031	53	11028	5	1	20.0000
ltrigg-rtg1	SNP	*	map_l250_m2_e1	homalt	99.6317	99.5217	99.7419	87.3537	2705	13	2705	7	7	100.0000
astatham-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.7602	99.5215	100.0000	47.2081	416	2	416	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.7602	99.5215	100.0000	47.5348	416	2	415	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.7602	99.5215	100.0000	47.3418	416	2	416	0	0
ckim-dragen	SNP	*	map_siren	homalt	99.7220	99.5214	99.9236	48.9049	54892	264	54896	42	38	90.4762
raldana-dualsentieon	SNP	*	map_l150_m2_e0	homalt	99.7131	99.5213	99.9056	69.8863	11643	56	11643	11	8	72.7273
ltrigg-rtg2	SNP	*	map_l150_m1_e0	homalt	99.7245	99.5210	99.9288	67.8086	11219	54	11221	8	7	87.5000
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.0824	99.5209	98.6478	57.7394	6647	32	6639	91	89	97.8022
ckim-gatk	SNP	*	segdup	het	98.5246	99.5207	97.5483	94.9213	17234	83	17228	433	5	1.1547
asubramanian-gatk	INDEL	*	*	homalt	99.2686	99.5207	99.0178	58.9491	124572	600	124599	1236	954	77.1845
ghariani-varprowl	SNP	*	segdup	het	96.9575	99.5207	94.5230	93.2841	17234	83	17241	999	5	0.5005
ghariani-varprowl	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.3614	99.5206	93.3967	80.5951	5397	26	5403	382	170	44.5026
ghariani-varprowl	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.3614	99.5206	93.3967	80.5951	5397	26	5403	382	170	44.5026
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	99.6249	99.5200	99.7301	51.4696	11818	57	11823	32	15	46.8750
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.5554	99.5199	99.5910	69.5435	19485	94	19481	80	32	40.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	99.5554	99.5199	99.5910	69.5435	19485	94	19481	80	32	40.0000
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.9650	99.5196	98.4165	72.8445	1243	6	1243	20	16	80.0000
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.9650	99.5196	98.4165	72.8445	1243	6	1243	20	16	80.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.6508	99.5196	97.7970	74.4625	1243	6	1243	28	20	71.4286
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.6508	99.5196	97.7970	74.4625	1243	6	1243	28	20	71.4286
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.4945	99.5196	97.4902	74.7924	1243	6	1243	32	23	71.8750
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.4945	99.5196	97.4902	74.7924	1243	6	1243	32	23	71.8750
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.3386	99.5196	97.1853	74.6230	1243	6	1243	36	27	75.0000
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.3386	99.5196	97.1853	74.6230	1243	6	1243	36	27	75.0000
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.5642	99.5193	99.6091	77.5046	6625	32	6625	26	8	30.7692
dgrover-gatk	INDEL	I1_5	map_l100_m0_e0	homalt	98.8067	99.5192	98.1043	81.0762	207	1	207	4	3	75.0000
ltrigg-rtg2	INDEL	I1_5	map_l100_m0_e0	homalt	99.2736	99.5192	99.0291	72.9659	207	1	204	2	1	50.0000

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