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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 211 212 213 214 215 216 217 218 219 ... 1720 1721 » 10701-10750 / 86044 show all
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7709	99.7523	97.8086	67.6045	18121	45	18121	406	388	95.5665
jli-custom	SNP	ti	map_siren	homalt	99.8561	99.7521	99.9604	48.6440	37822	94	37819	15	15	100.0000
hfeng-pmm1	SNP	*	map_l150_m2_e0	homalt	99.7606	99.7521	99.7692	73.4870	11670	29	11670	27	10	37.0370
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	99.7622	99.7519	99.7725	68.8442	4825	12	4825	11	7	63.6364
eyeh-varpipe	SNP	ti	map_siren	het	99.1597	99.7515	98.5748	60.2517	62227	155	60657	877	34	3.8769
jlack-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8134	99.7514	99.8755	42.5661	1605	4	1605	2	2	100.0000
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8445	99.7514	99.9377	43.6886	1605	4	1605	1	1	100.0000
bgallagher-sentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8755	99.7514	100.0000	43.3263	1605	4	1605	0	0
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8445	99.7514	99.9377	43.3110	1605	4	1605	1	1	100.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8755	99.7514	100.0000	52.7941	1605	4	1605	0	0
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8445	99.7514	99.9377	43.4109	1605	4	1605	1	1	100.0000
eyeh-varpipe	SNP	ti	map_l250_m1_e0	homalt	99.8123	99.7511	99.8737	88.1405	1603	4	1581	2	2	100.0000
jli-custom	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.4506	99.7507	99.1523	64.1117	27609	69	27604	236	18	7.6271
ltrigg-rtg1	SNP	tv	map_l125_m2_e0	homalt	99.8420	99.7507	99.9334	68.3459	6002	15	6003	4	4	100.0000
hfeng-pmm3	SNP	ti	segdup	het	99.5602	99.7506	99.3705	89.3230	12000	30	11998	76	0	0.0000
rpoplin-dv42	SNP	*	segdup	*	99.7488	99.7506	99.7470	89.9398	27997	70	27991	71	31	43.6620
eyeh-varpipe	SNP	tv	map_l125_m1_e0	*	97.8643	99.7502	96.0484	73.9143	15976	40	15872	653	17	2.6034
jlack-gatk	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.1165	99.7497	98.4914	72.1867	30684	77	30684	470	460	97.8723
ltrigg-rtg1	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8619	99.7492	99.9748	32.5060	3977	10	3969	1	0	0.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e1	het	96.0176	99.7490	92.5553	72.3251	15898	40	15702	1263	16	1.2668
astatham-gatk	SNP	tv	func_cds	*	99.8283	99.7483	99.9083	29.1951	4360	11	4359	4	0	0.0000
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3720	99.7481	98.9987	88.0853	792	2	791	8	6	75.0000
jlack-gatk	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.1812	99.7479	98.6208	60.0301	17806	45	17805	249	13	5.2209
jlack-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	98.5569	99.7479	97.3939	48.1612	6727	17	6727	180	3	1.6667
ckim-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2183	99.7479	98.6942	45.7109	6727	17	6727	89	2	2.2472
jlack-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7712	99.7476	99.7949	55.7977	25295	64	25298	52	25	48.0769
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.7994	99.7475	99.8514	49.4629	6716	17	6718	10	6	60.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	76.3850	99.7475	61.8895	40.6948	4741	12	4828	2973	2967	99.7982
astatham-gatk	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8587	99.7475	99.9702	56.3085	20148	51	20148	6	6	100.0000
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8284	99.7474	99.9096	58.5102	11056	28	11052	10	4	40.0000
jli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.7488	99.7472	97.7702	52.2408	3157	8	3157	72	71	98.6111
ckim-dragen	INDEL	D6_15	*	homalt	97.3161	99.7471	95.0008	59.2976	6310	16	6309	332	329	99.0964
astatham-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	99.7024	99.7469	99.6579	53.4220	6699	17	6701	23	8	34.7826
bgallagher-sentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.3553	99.7468	97.0021	67.1820	18120	46	18120	560	541	96.6071
bgallagher-sentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.3553	99.7468	97.0021	67.1820	18120	46	18120	560	541	96.6071
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.5997	99.7468	99.4531	47.3533	2364	6	2364	13	13	100.0000
jli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.6207	99.7468	99.4949	51.0355	1576	4	1576	8	0	0.0000
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	96.8428	99.7468	94.1030	63.9275	1576	4	1516	95	6	6.3158
gduggal-bwafb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	98.6534	99.7468	97.5836	59.0978	1576	4	1575	39	7	17.9487
hfeng-pmm3	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.8555	99.7467	99.9646	71.3411	16932	43	16932	6	3	50.0000
hfeng-pmm3	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.8555	99.7467	99.9646	71.3411	16932	43	16932	6	3	50.0000
ltrigg-rtg1	SNP	tv	map_l150_m1_e0	homalt	99.8478	99.7466	99.9492	70.2200	3936	10	3937	2	2	100.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e0	het	96.0096	99.7465	92.5426	72.2574	15737	40	15549	1253	16	1.2769
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	het	98.8341	99.7463	97.9383	44.8790	11404	29	11401	240	3	1.2500
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	het	98.6015	99.7463	97.4826	44.5639	11404	29	11462	296	9	3.0405
qzeng-custom	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7451	99.7462	99.7441	40.9924	2751	7	2728	7	5	71.4286
jli-custom	SNP	*	map_siren	homalt	99.8512	99.7462	99.9564	49.8643	55016	140	55010	24	24	100.0000
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.8726	99.7455	100.0000	64.4122	784	2	784	0	0
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.6073	99.7455	99.4695	62.0342	784	2	750	4	0	0.0000
asubramanian-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.8726	99.7455	100.0000	62.0339	784	2	784	0	0

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