PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
1001-1050 / 86044 show all | |||||||||||||||
| raldana-dualsentieon | INDEL | D16_PLUS | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 99.5671 | 100.0000 | 99.1379 | 69.7128 | 230 | 0 | 230 | 2 | 2 | 100.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 100.0000 | 100.0000 | 100.0000 | 63.4146 | 45 | 0 | 45 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 96.2963 | 100.0000 | 92.8571 | 41.6667 | 13 | 0 | 13 | 1 | 1 | 100.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l100_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 87.5000 | 4 | 0 | 5 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | * | 92.3077 | 100.0000 | 85.7143 | 95.0355 | 12 | 0 | 12 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | het | 90.0000 | 100.0000 | 81.8182 | 94.3590 | 9 | 0 | 9 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 94.7368 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.0588 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 89.2857 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m1_e0 | homalt | 88.8889 | 100.0000 | 80.0000 | 96.4029 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 3 | 0 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m2_e0 | homalt | 88.8889 | 100.0000 | 80.0000 | 96.8944 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l125_m2_e1 | homalt | 88.8889 | 100.0000 | 80.0000 | 96.9880 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l150_m0_e0 | * | 87.5000 | 100.0000 | 77.7778 | 94.7977 | 7 | 0 | 7 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l150_m0_e0 | het | 87.5000 | 100.0000 | 77.7778 | 92.6829 | 7 | 0 | 7 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.0000 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.0000 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m0_e0 | * | 50.0000 | 100.0000 | 33.3333 | 94.7368 | 1 | 0 | 1 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m0_e0 | het | 50.0000 | 100.0000 | 33.3333 | 93.0233 | 1 | 0 | 1 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m1_e0 | * | 80.0000 | 100.0000 | 66.6667 | 95.1220 | 4 | 0 | 4 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m1_e0 | het | 75.0000 | 100.0000 | 60.0000 | 94.0476 | 3 | 0 | 3 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e0 | * | 83.3333 | 100.0000 | 71.4286 | 95.3020 | 5 | 0 | 5 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e0 | het | 75.0000 | 100.0000 | 60.0000 | 95.0495 | 3 | 0 | 3 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.3684 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e1 | * | 83.3333 | 100.0000 | 71.4286 | 95.3333 | 5 | 0 | 5 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e1 | het | 75.0000 | 100.0000 | 60.0000 | 95.0980 | 3 | 0 | 3 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.3684 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | segdup | homalt | 100.0000 | 100.0000 | 100.0000 | 95.6835 | 12 | 0 | 12 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 42.8571 | 4 | 0 | 4 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D16_PLUS | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 0.0000 | 4 | 0 | 4 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9263 | 4 | 0 | 4 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9456 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.5885 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9339 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | func_cds | * | 100.0000 | 100.0000 | 100.0000 | 38.9313 | 159 | 0 | 160 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | func_cds | het | 100.0000 | 100.0000 | 100.0000 | 44.8718 | 85 | 0 | 86 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 29.5238 | 74 | 0 | 74 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 97.1429 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 100.0000 | 100.0000 | 100.0000 | 99.2674 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 98.6755 | 10 | 0 | 10 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 100.0000 | 100.0000 | 100.0000 | 98.4749 | 7 | 0 | 7 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.6667 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | homalt | 100.0000 | 100.0000 | 100.0000 | 99.2481 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 99.8647 | 100.0000 | 99.7297 | 81.5645 | 369 | 0 | 369 | 1 | 1 | 100.0000 | |
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 100.0000 | 100.0000 | 100.0000 | 99.9991 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.9914 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 99.8638 | 100.0000 | 99.7280 | 50.5648 | 3666 | 0 | 3666 | 10 | 10 | 100.0000 | |