PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1714 1715 1716 1717 1718 1719 1720 1721 » 85851-85900 / 86044 show all
gduggal-bwavard	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	22	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	22	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	22	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l250_m0_e0	het		0.0000	0.0000	97.3214	0	0	0	3	0	0.0000
gduggal-bwavard	INDEL	I6_15	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	72	0	0	0
gduggal-bwavard	INDEL	I6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	45	0	0	0
gduggal-bwavard	INDEL	I6_15	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	INDEL	I6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
gduggal-bwavard	SNP	*	decoy	*	0.0000	0.0000	100.0000	99.9992	0	0	2	0	0
gduggal-bwavard	SNP	*	decoy	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	decoy	homalt	0.0000	0.0000	100.0000	99.9933	0	0	2	0	0
gduggal-bwavard	SNP	*	func_cds	hetalt		0.0000	0.0000	0.0000	0	10	0	0	0
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	13	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	15	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge