PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
8301-8350 / 86044 show all
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e0*
83.3333
100.0000
71.4286
95.6790
50520
0.0000
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e0het
75.0000
100.0000
60.0000
95.2381
30320
0.0000
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
92.8571
10100
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
97.6744
10100
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e1*
83.3333
100.0000
71.4286
95.7317
50520
0.0000
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e1het
75.0000
100.0000
60.0000
95.3271
30320
0.0000
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
92.8571
10100
hfeng-pmm1INDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.6744
10100
hfeng-pmm1INDELD16_PLUSsegduphet
94.5946
100.0000
89.7436
95.7330
3703540
0.0000
hfeng-pmm1INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
95.3668
1201200
hfeng-pmm1INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
hfeng-pmm1INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
hfeng-pmm1INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9303
40400
hfeng-pmm1INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9489
20200
hfeng-pmm1INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6479
10100
hfeng-pmm1INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9352
10100
hfeng-pmm1INDELD1_5func_cds*
99.6885
100.0000
99.3789
38.0769
159016010
0.0000
hfeng-pmm1INDELD1_5func_cdshet
99.4220
100.0000
98.8506
43.8710
8508610
0.0000
hfeng-pmm1INDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
27.4510
7407400
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.4359
10100
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.7849
1001000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5597
70700
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.0588
10100
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3399
20200
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9990
10100
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9922
10100
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
38.3689
13300133000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
53.1250
1301322
100.0000
hfeng-pmm1INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.7612
30300
hfeng-pmm1INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
hfeng-pmm1INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.6921
1301300
hfeng-pmm1INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.6000
30300
hfeng-pmm1INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.0132
30300
hfeng-pmm1INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.0769
30300
hfeng-pmm1INDELD1_5segduphomalt
100.0000
100.0000
100.0000
93.9603
359035900
hfeng-pmm1INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9933
10100
hfeng-pmm1INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9894
10100
hfeng-pmm1INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
hfeng-pmm1INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
hfeng-pmm1INDELD6_15HG002compoundhethomalt
53.3333
100.0000
36.3636
67.8049
240244242
100.0000
hfeng-pmm1INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8942
10100
hfeng-pmm1INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0991
10100
hfeng-pmm1INDELD6_15func_cds*
100.0000
100.0000
100.0000
50.0000
4304300
hfeng-pmm1INDELD6_15func_cdshet
100.0000
100.0000
100.0000
46.2963
2902900
hfeng-pmm1INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm1INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
55.5556
1201200
hfeng-pmm1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.4912
60600
hfeng-pmm1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.2477
30300
hfeng-pmm1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200