PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81901-81950 / 86044 show all
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
016000
gduggal-bwavardSNPtvmap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
041000
gduggal-bwavardSNPtvmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
042000
gduggal-bwavardSNPtvmap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
043000
gduggal-bwavardSNPtvmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardSNPtvmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNPtvmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNPtvmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNPtvmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardSNPtvmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNPtvmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNPtvmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNPtvmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardSNPtvmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvsegduphetalt
0.0000
0.0000
0.0000
07000
gduggal-bwavardSNPtvsegdupwithalt*
0.0000
100.0000
00000
gduggal-bwavardSNPtvsegdupwithalthet
0.0000
100.0000
00000
gduggal-bwavardSNPtvsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
03000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
02000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000