PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
80251-80300 / 86044 show all | |||||||||||||||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e0 | * | 0.0000 | 0.0000 | 96.8000 | 0 | 0 | 0 | 4 | 1 | 25.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e0 | het | 0.0000 | 0.0000 | 95.7895 | 0 | 0 | 0 | 4 | 1 | 25.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e1 | * | 0.0000 | 0.0000 | 96.8504 | 0 | 0 | 0 | 4 | 1 | 25.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e1 | het | 0.0000 | 0.0000 | 95.8763 | 0 | 0 | 0 | 4 | 1 | 25.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l125_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l150_m0_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l150_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l150_m1_e0 | * | 0.0000 | 0.0000 | 96.2025 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l150_m1_e0 | het | 0.0000 | 0.0000 | 95.0820 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l150_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e0 | * | 0.0000 | 0.0000 | 96.7391 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e0 | het | 0.0000 | 0.0000 | 95.6522 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e1 | * | 0.0000 | 0.0000 | 96.8085 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e1 | het | 0.0000 | 0.0000 | 95.7746 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l150_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l250_m0_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l250_m1_e0 | * | 0.0000 | 0.0000 | 97.5000 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l250_m1_e0 | het | 0.0000 | 0.0000 | 96.4286 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l250_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e0 | * | 0.0000 | 0.0000 | 98.0392 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e0 | het | 0.0000 | 0.0000 | 97.2222 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e1 | * | 0.0000 | 0.0000 | 98.0769 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e1 | het | 0.0000 | 0.0000 | 97.2973 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_l250_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | map_siren | * | 0.0000 | 0.0000 | 60.0000 | 96.0317 | 0 | 0 | 6 | 4 | 1 | 25.0000 | |
| cchapple-custom | INDEL | C6_15 | map_siren | het | 0.0000 | 0.0000 | 55.5556 | 95.4545 | 0 | 0 | 5 | 4 | 1 | 25.0000 | |
| cchapple-custom | INDEL | C6_15 | map_siren | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 98.1481 | 0 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | C6_15 | segdup | * | 0.0000 | 0.0000 | 100.0000 | 98.8131 | 0 | 0 | 4 | 0 | 0 | ||
| cchapple-custom | INDEL | C6_15 | segdup | het | 0.0000 | 0.0000 | 100.0000 | 99.2593 | 0 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | C6_15 | segdup | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | C6_15 | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 97.0149 | 0 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | C6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | C6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||