PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
77101-77150 / 86044 show all
ckim-isaacSNPtidecoyhomalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ckim-isaacSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNPtimap_l150_m0_e0hetalt
0.0000
100.0000
03000
ckim-isaacSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalt*
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalthet
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalthetalt
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalthomalt
0.0000
100.0000
00000
ckim-isaacSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELI6_15map_l250_m0_e0het
0.0000
0.0000
98.8372
00011
100.0000
dgrover-gatkINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
dgrover-gatkINDELI6_15map_l250_m0_e0homalt
0.0000
100.0000
01000
dgrover-gatkINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
dgrover-gatkINDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
dgrover-gatkINDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
dgrover-gatkINDELI6_15segdupwithalt*
0.0000
100.0000
00000
dgrover-gatkINDELI6_15segdupwithalthet
0.0000
100.0000
00000
dgrover-gatkINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
dgrover-gatkINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
dgrover-gatkSNP*decoy*
0.0000
100.0000
00000
dgrover-gatkSNP*decoyhet
0.0000
100.0000
00000
dgrover-gatkSNP*decoyhetalt
0.0000
100.0000
00000
dgrover-gatkSNP*decoyhomalt
0.0000
100.0000
00000
dgrover-gatkSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000