PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76801-76850 / 86044 show all
ckim-vqsrINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrINDELD6_15decoyhet
0.0000
100.0000
00000
ckim-vqsrINDELD6_15decoyhomalt
0.0000
100.0000
00000
ckim-vqsrINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELD6_15segdupwithalt*
0.0000
100.0000
00000
ckim-vqsrINDELD6_15segdupwithalthet
0.0000
100.0000
00000
ckim-vqsrINDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSdecoy*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD16_PLUSmap_l100_m0_e0homalt
0.0000
100.0000
05000
ckim-isaacINDELD16_PLUSmap_l125_m0_e0homalt
0.0000
100.0000
02000
ckim-isaacINDELD16_PLUSmap_l125_m1_e0homalt
0.0000
100.0000
04000
ckim-isaacINDELD16_PLUSmap_l125_m2_e0homalt
0.0000
100.0000
04000
ckim-isaacINDELD16_PLUSmap_l125_m2_e1homalt
0.0000
100.0000
04000
ckim-isaacINDELD16_PLUSmap_l150_m0_e0*
0.0000
0.0000
98.5507
07010
0.0000
ckim-isaacINDELD16_PLUSmap_l150_m0_e0het
0.0000
0.0000
98.1818
07010
0.0000
ckim-isaacINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l150_m2_e0homalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l250_m0_e0*
0.0000
100.0000
01000
ckim-isaacINDELD16_PLUSmap_l250_m0_e0het
0.0000
100.0000
01000
ckim-isaacINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l250_m1_e0het
0.0000
100.0000
03000
ckim-isaacINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSmap_l250_m2_e0het
0.0000
100.0000
03000