PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
74201-74250 / 86044 show all
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
89.6552
95.9778
002632
66.6667
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
77.7778
96.3415
00721
50.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
95.7447
001111
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
95.8549
00800
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
89.4737
96.3844
003443
75.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
78.5714
96.3918
001132
66.6667
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
93.3333
96.2312
001411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
100.0000
96.6038
00900
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
94.1176
95.7393
001611
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
100.0000
96.5278
00500
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
88.8889
94.6746
00811
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
100.0000
96.5116
00300
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
100.0000
96.7742
00100
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
100.0000
92.3077
00100
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
100.0000
97.2222
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
91.6667
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
88.8889
94.6746
00811
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
75.0000
94.0299
00311
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
100.0000
95.2381
00300
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
94.8718
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
80.0000
95.1923
00411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
50.0000
95.3488
00111
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
100.0000
95.3488
00200
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
100.0000
94.4444
00100
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
100.0000
86.9565
00300
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
0.0000
0.0000
100.0000
90.0000
00100
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
100.0000
88.8889
00100
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
75.0000
00100
egarrison-hhgaSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtisegdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaSNPtisegdupwithalthet
0.0000
100.0000
00000
egarrison-hhgaSNPtisegdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtisegdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNPtvdecoy*
0.0000
100.0000
00000
egarrison-hhgaSNPtvdecoyhet
0.0000
100.0000
00000
egarrison-hhgaSNPtvdecoyhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvdecoyhomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000