PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
73551-73600 / 86044 show all
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5segdupwithalt*
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5segdupwithalthet
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15decoy*
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15decoyhet
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15decoyhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15decoyhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
96.5517
00011
100.0000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l125_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l150_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m0_e0*
0.0000
0.0000
99.4253
01011
100.0000
jmaeng-gatkINDELI6_15map_l250_m0_e0het
0.0000
0.0000
99.2424
00011
100.0000
jmaeng-gatkINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m0_e0homalt
0.0000
100.0000
01000
jmaeng-gatkINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000