PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
73101-73150 / 86044 show all
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
95.3291
004400
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
98.0337
00700
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
98.1132
96.0015
0010421
50.0000
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
97.5610
95.6337
004010
0.0000
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
98.1132
95.6414
005211
100.0000
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.5806
001200
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
96.5517
95.1920
0016862
33.3333
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
96.1538
94.3437
007530
0.0000
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
96.0526
95.1868
007332
66.6667
ltrigg-rtg2INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
100.0000
96.9743
002000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
100.0000
95.7389
007900
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
100.0000
94.8845
003100
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
100.0000
95.7974
003900
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
100.0000
97.1875
00900
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
66.6667
98.0263
00211
100.0000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
50.0000
97.7528
00111
100.0000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
100.0000
94.7368
00100
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
100.0000
97.4576
00300
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
100.0000
94.2308
00300
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
98.6667
00200
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
100.0000
91.7431
004500
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
100.0000
89.5197
002400
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
100.0000
91.9048
001700
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
96.2264
00400
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
80.0000
96.0938
00410
0.0000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
75.0000
94.8052
00310
0.0000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
100.0000
93.7500
00100
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
100.0000
91.5254
001500
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_11to50het
0.0000
0.0000
100.0000
90.7692
00600
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
100.0000
92.0000
00600
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
91.8919
00300
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m0_e0*
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m0_e0het
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m0_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m1_e0*
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m1_e0het
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m1_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m1_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m2_e0*
0.0000
100.0000
00000
ltrigg-rtg2INDELC6_15map_l100_m2_e0het
0.0000
100.0000
00000