PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
72751-72800 / 86044 show all
ltrigg-rtg2INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
78.5714
96.2766
001132
66.6667
ltrigg-rtg2INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
93.3333
96.1929
001411
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
100.0000
96.4567
00900
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
94.1176
95.6522
001611
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
100.0000
96.4789
00500
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
88.8889
94.6108
00811
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
100.0000
96.3415
00300
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
100.0000
96.6667
00100
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
100.0000
92.3077
00100
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
100.0000
97.1831
00200
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
91.6667
00200
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
88.8889
94.5783
00811
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
75.0000
93.9394
00311
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
100.0000
95.1613
00300
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
94.7368
00200
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
80.0000
94.6809
00411
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
50.0000
94.5946
00111
100.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
100.0000
95.0000
00200
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
100.0000
94.1176
00100
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
100.0000
87.5000
00300
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
0.0000
0.0000
100.0000
90.9091
00100
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
100.0000
88.8889
00100
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
75.0000
00100
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m0_e0*
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m0_e0het
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m0_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m1_e0*
0.0000
0.0000
96.4286
00011
100.0000
ltrigg-rtg2INDELC16_PLUSmap_l100_m1_e0het
0.0000
0.0000
93.3333
00011
100.0000
ltrigg-rtg2INDELC16_PLUSmap_l100_m1_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m1_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e0*
0.0000
0.0000
96.8750
00011
100.0000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e0het
0.0000
0.0000
93.7500
00011
100.0000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e1*
0.0000
0.0000
96.9697
00011
100.0000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e1het
0.0000
0.0000
94.1176
00011
100.0000
ltrigg-rtg2INDELC16_PLUSmap_l100_m2_e1hetalt
0.0000
100.0000
00000