PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
72651-72700 / 86044 show all
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
0.0000
00100
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1SNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvsegdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1SNPtvsegdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1SNPtvsegdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvsegdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1SNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDEL*segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg2INDEL*segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUS**
0.0000
0.0000
92.0000
95.4463
006964
66.6667
ltrigg-rtg2INDELC16_PLUS*het
0.0000
0.0000
84.6154
96.1367
002242
50.0000
ltrigg-rtg2INDELC16_PLUS*hetalt
0.0000
0.0000
96.6667
94.6043
002911
100.0000
ltrigg-rtg2INDELC16_PLUS*homalt
0.0000
0.0000
94.7368
95.4545
001811
100.0000
ltrigg-rtg2INDELC16_PLUSHG002complexvar*
0.0000
0.0000
94.2029
89.5928
006543
75.0000
ltrigg-rtg2INDELC16_PLUSHG002complexvarhet
0.0000
0.0000
91.3043
89.9123
002121
50.0000
ltrigg-rtg2INDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
96.4286
87.8261
002711
100.0000
ltrigg-rtg2INDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
94.4444
91.2195
001711
100.0000
ltrigg-rtg2INDELC16_PLUSHG002compoundhet*
0.0000
0.0000
87.8788
88.4211
002944
100.0000
ltrigg-rtg2INDELC16_PLUSHG002compoundhethet
0.0000
0.0000
60.0000
89.3617
00322
100.0000
ltrigg-rtg2INDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
96.2963
88.0000
002611
100.0000
ltrigg-rtg2INDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
92.3077
00011
100.0000
ltrigg-rtg2INDELC16_PLUSdecoy*
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSdecoyhet
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSdecoyhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELC16_PLUSfunc_cdshomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
66.6667
97.6684
00632
66.6667
ltrigg-rtg2INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
33.3333
97.8261
00121
50.0000
ltrigg-rtg2INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
75.0000
97.5309
00311
100.0000