PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
72301-72350 / 86044 show all
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
97.8022
96.1813
008921
50.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
0.0000
0.0000
97.3684
95.2912
003710
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
97.7273
96.1027
004311
100.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.9866
00900
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
100.0000
95.8649
008200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
95.1895
003300
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
95.4397
004200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
98.1383
00700
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
97.0874
96.0985
0010031
33.3333
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
95.2381
95.4545
004020
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
97.9592
95.8858
004811
100.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.7143
001200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
95.9064
95.2710
0016472
28.5714
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
94.8718
94.2605
007440
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
95.8904
95.3115
007032
66.6667
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
100.0000
97.1429
002000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
100.0000
95.9052
007600
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
100.0000
94.8590
003100
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
100.0000
96.0954
003600
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
100.0000
97.2810
00900
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
33.3333
98.0132
00121
50.0000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
97.6190
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
98.8764
00011
100.0000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
100.0000
95.0000
00100
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
100.0000
97.3913
00300
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
100.0000
93.7500
00300
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
98.6111
00200
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
100.0000
91.8969
004400
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
100.0000
89.6396
002300
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
100.0000
91.9431
001700
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
96.3636
00400
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
80.0000
96.2687
00410
0.0000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
75.0000
94.8052
00310
0.0000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
100.0000
94.4444
00100
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_11to50*
0.0000
0.0000
100.0000
91.5254
001500
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_11to50het
0.0000
0.0000
100.0000
90.7692
00600
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
100.0000
91.8919
00600
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
92.1053
00300
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15map_l100_m0_e0*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15map_l100_m0_e0het
0.0000
100.0000
00000