PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
71251-71300 / 86044 show all
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
097000
jpowers-varprowlINDELD6_15map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELD6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
06000
jpowers-varprowlINDELD6_15map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELD6_15map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELD6_15map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
020000
jpowers-varprowlINDELD6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlINDELD6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELD6_15map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELD6_15map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15segdupwithalt*
0.0000
100.0000
00000
jpowers-varprowlINDELD6_15segdupwithalthet
0.0000
100.0000
00000
jpowers-varprowlINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
jpowers-varprowlINDELD6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI16_PLUSdecoy*
0.0000
100.0000
00000
jpowers-varprowlINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
jpowers-varprowlINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
jli-customSNP*decoy*
0.0000
100.0000
00000
jli-customSNP*decoyhet
0.0000
100.0000
00000
jli-customSNP*decoyhetalt
0.0000
100.0000
00000
jli-customSNP*decoyhomalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
jli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
jli-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000