PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
56951-57000 / 86044 show all
ghariani-varprowlSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
013000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapvardSNP*map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-snapvardSNP*map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
gduggal-snapvardSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardSNP*map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
gduggal-snapvardSNP*map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
gduggal-snapvardSNP*segduphetalt
0.0000
0.0000
0.0000
07000
gduggal-snapvardSNP*segdupwithalt*
0.0000
100.0000
00000
gduggal-snapvardSNP*segdupwithalthet
0.0000
100.0000
00000
gduggal-snapvardSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapvardSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtidecoy*
0.0000
0.0000
100.0000
99.9986
00200
gduggal-snapvardSNPtidecoyhet
0.0000
100.0000
00000
gduggal-snapvardSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtidecoyhomalt
0.0000
0.0000
100.0000
99.9896
00200
gduggal-snapvardSNPtifunc_cdshetalt
0.0000
0.0000
0.0000
08000
gduggal-snapvardSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000