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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 967 968 969 970 971 972 973 974 975 ... 1720 1721 » 48501-48550 / 86044 show all
bgallagher-sentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.6115	86.6324	99.4771	37.4276	2359	364	2473	13	12	92.3077
gduggal-snapvard	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	57.3256	86.6375	42.8337	90.6835	791	122	783	1045	45	4.3062
ltrigg-rtg1	INDEL	D16_PLUS	HG002complexvar	hetalt	90.0802	86.6397	93.8053	58.5321	214	33	212	14	14	100.0000
ltrigg-rtg2	INDEL	D16_PLUS	HG002complexvar	hetalt	90.0287	86.6397	93.6937	56.8932	214	33	208	14	14	100.0000
asubramanian-gatk	INDEL	D1_5	map_l125_m2_e0	het	89.8280	86.6492	93.2489	90.9553	662	102	663	48	4	8.3333
ckim-gatk	SNP	tv	map_l100_m1_e0	het	91.3400	86.6511	96.5654	83.3110	13359	2058	13355	475	16	3.3684
asubramanian-gatk	INDEL	*	map_l125_m2_e1	*	91.1601	86.6517	96.1634	97.1389	1928	297	1930	77	8	10.3896
astatham-gatk	SNP	*	map_l100_m0_e0	*	92.7245	86.6569	99.7057	72.7426	28459	4382	28455	84	35	41.6667
asubramanian-gatk	INDEL	*	map_l125_m1_e0	*	91.1206	86.6635	96.0609	96.9394	1826	281	1829	75	8	10.6667
asubramanian-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	87.1508	86.6667	87.6404	95.9118	78	12	78	11	3	27.2727
asubramanian-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	92.8571	86.6667	100.0000	89.3443	13	2	13	0	0
asubramanian-gatk	INDEL	I16_PLUS	map_l125_m1_e0	*	86.6667	86.6667	86.6667	96.4455	13	2	13	2	0	0.0000
asubramanian-gatk	INDEL	I16_PLUS	map_l125_m2_e0	*	86.6667	86.6667	86.6667	96.9450	13	2	13	2	0	0.0000
asubramanian-gatk	INDEL	I16_PLUS	map_l125_m2_e1	*	86.6667	86.6667	86.6667	96.9512	13	2	13	2	0	0.0000
anovak-vg	INDEL	I6_15	map_l125_m1_e0	homalt	78.7879	86.6667	72.2222	87.0504	13	2	13	5	4	80.0000
anovak-vg	INDEL	I6_15	map_l125_m2_e0	homalt	78.7879	86.6667	72.2222	89.0244	13	2	13	5	4	80.0000
anovak-vg	INDEL	I6_15	map_l125_m2_e1	homalt	78.7879	86.6667	72.2222	89.3491	13	2	13	5	4	80.0000
bgallagher-sentieon	INDEL	I6_15	map_l150_m1_e0	het	89.6552	86.6667	92.8571	95.2703	13	2	13	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l150_m2_e0	het	89.6552	86.6667	92.8571	95.7187	13	2	13	1	1	100.0000
astatham-gatk	INDEL	I16_PLUS	map_l125_m1_e0	*	86.6667	86.6667	86.6667	96.6960	13	2	13	2	0	0.0000
astatham-gatk	INDEL	I16_PLUS	map_l125_m2_e0	*	83.8710	86.6667	81.2500	96.8872	13	2	13	3	0	0.0000
astatham-gatk	INDEL	I16_PLUS	map_l125_m2_e1	*	83.8710	86.6667	81.2500	96.8932	13	2	13	3	0	0.0000
astatham-gatk	INDEL	I1_5	map_l250_m0_e0	het	92.8571	86.6667	100.0000	98.5507	13	2	13	0	0
astatham-gatk	INDEL	I6_15	map_l150_m1_e0	het	89.6552	86.6667	92.8571	95.4248	13	2	13	1	1	100.0000
astatham-gatk	INDEL	I6_15	map_l150_m2_e0	het	89.6552	86.6667	92.8571	95.8333	13	2	13	1	1	100.0000
jpowers-varprowl	INDEL	D16_PLUS	map_l150_m1_e0	*	86.6667	86.6667	86.6667	98.7923	13	2	13	2	1	50.0000
ltrigg-rtg2	INDEL	I1_5	map_l250_m0_e0	het	89.6552	86.6667	92.8571	94.4444	13	2	13	1	0	0.0000
ltrigg-rtg2	SNP	ti	map_l150_m1_e0	hetalt	92.8571	86.6667	100.0000	61.7647	13	2	13	0	0
ltrigg-rtg2	SNP	ti	map_l150_m2_e0	hetalt	92.8571	86.6667	100.0000	69.0476	13	2	13	0	0
ltrigg-rtg2	SNP	ti	map_l150_m2_e1	hetalt	92.8571	86.6667	100.0000	69.0476	13	2	13	0	0
ltrigg-rtg2	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	90.8215	86.6667	95.3947	86.7596	143	22	145	7	0	0.0000
ltrigg-rtg1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	92.8571	86.6667	100.0000	95.4225	13	2	13	0	0
ltrigg-rtg1	INDEL	I1_5	map_l250_m0_e0	het	89.6552	86.6667	92.8571	93.5185	13	2	13	1	0	0.0000
jmaeng-gatk	INDEL	I6_15	map_l125_m1_e0	het	86.6667	86.6667	86.6667	94.3609	26	4	26	4	1	25.0000
jmaeng-gatk	INDEL	I6_15	map_l125_m2_e0	het	86.6667	86.6667	86.6667	95.0166	26	4	26	4	1	25.0000
jmaeng-gatk	INDEL	I6_15	map_l125_m2_e1	het	86.6667	86.6667	86.6667	95.1378	26	4	26	4	1	25.0000
ndellapenna-hhga	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	81.2500	86.6667	76.4706	96.7803	13	2	13	4	4	100.0000
qzeng-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	51.4512	86.6667	36.5854	95.2982	13	2	15	26	2	7.6923
qzeng-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	49.0937	86.6667	34.2466	60.9626	13	2	25	48	1	2.0833
raldana-dualsentieon	INDEL	D1_5	map_l125_m2_e0	hetalt	92.8571	86.6667	100.0000	94.7791	13	2	13	0	0
raldana-dualsentieon	INDEL	D1_5	map_l125_m2_e1	hetalt	92.8571	86.6667	100.0000	94.9219	13	2	13	0	0
mlin-fermikit	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	68.4211	86.6667	56.5217	98.1437	13	2	13	10	10	100.0000
raldana-dualsentieon	INDEL	I16_PLUS	map_l125_m1_e0	*	92.8571	86.6667	100.0000	93.9815	13	2	13	0	0
raldana-dualsentieon	INDEL	I16_PLUS	map_l125_m2_e0	*	89.6552	86.6667	92.8571	94.6970	13	2	13	1	0	0.0000
raldana-dualsentieon	INDEL	I16_PLUS	map_l125_m2_e1	*	89.6552	86.6667	92.8571	94.7170	13	2	13	1	0	0.0000
raldana-dualsentieon	INDEL	I6_15	map_l125_m1_e0	homalt	86.6667	86.6667	86.6667	90.0662	13	2	13	2	0	0.0000
raldana-dualsentieon	INDEL	I6_15	map_l125_m2_e0	homalt	86.6667	86.6667	86.6667	91.1765	13	2	13	2	0	0.0000
raldana-dualsentieon	INDEL	I6_15	map_l125_m2_e1	homalt	86.6667	86.6667	86.6667	91.5254	13	2	13	2	0	0.0000
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	92.8571	86.6667	100.0000	96.9412	13	2	13	0	0
rpoplin-dv42	INDEL	D16_PLUS	map_l100_m1_e0	homalt	86.6667	86.6667	86.6667	91.3295	13	2	13	2	1	50.0000

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