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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 781 782 783 784 785 786 787 788 789 ... 1720 1721 » 39201-39250 / 86044 show all
anovak-vg	INDEL	I1_5	map_l100_m2_e0	*	58.1587	59.3567	57.0081	84.8215	812	556	846	638	455	71.3166
gduggal-bwaplat	SNP	tv	map_l100_m0_e0	het	74.3090	59.3741	99.2822	90.5912	4288	2934	4288	31	10	32.2581
gduggal-bwaplat	SNP	*	map_l150_m2_e0	het	74.3081	59.3950	99.2206	92.2348	11958	8175	11966	94	27	28.7234
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	71.7619	59.4118	90.5941	73.3930	909	621	915	95	49	51.5789
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	71.7619	59.4118	90.5941	73.3930	909	621	915	95	49	51.5789
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	70.1319	59.4340	85.5263	73.7024	63	43	65	11	7	63.6364
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	73.9130	59.4406	97.7011	62.3377	170	116	170	4	4	100.0000
jpowers-varprowl	INDEL	D16_PLUS	map_siren	*	63.1970	59.4406	67.4603	94.5431	85	58	85	41	36	87.8049
mlin-fermikit	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	64.3730	59.4553	70.1776	54.1149	2336	1593	2332	991	976	98.4864
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	72.3288	59.4595	92.3077	71.1111	22	15	24	2	1	50.0000
gduggal-bwavard	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	59.4595	59.4595	59.4595	84.3882	22	15	22	15	6	40.0000
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	69.4006	59.4595	83.3333	67.5676	22	15	10	2	2	100.0000
gduggal-bwavard	INDEL	D6_15	*	*	62.6145	59.4780	66.1003	55.5649	15519	10573	15367	7881	7658	97.1704
qzeng-custom	INDEL	*	map_l250_m2_e1	homalt	73.4760	59.4828	96.0784	96.3480	69	47	98	4	1	25.0000
gduggal-bwaplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	73.9073	59.4883	97.5524	91.9640	279	190	279	7	7	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	59.4937	0.0000	0.0000	141	96	0	0	0
gduggal-bwaplat	SNP	*	map_l125_m1_e0	*	74.4387	59.4965	99.4030	86.9422	26968	18359	26975	162	46	28.3951
qzeng-custom	SNP	*	map_l150_m0_e0	homalt	74.2731	59.5011	98.8021	79.7981	2433	1656	2392	29	29	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	66.4101	59.5041	75.1295	58.0435	144	98	145	48	41	85.4167
mlin-fermikit	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	70.7177	59.5238	87.0968	98.6964	25	17	27	4	3	75.0000
eyeh-varpipe	INDEL	*	map_l125_m2_e0	hetalt	73.6278	59.5238	96.4912	93.6947	25	17	55	2	1	50.0000
ciseli-custom	INDEL	*	map_l100_m0_e0	homalt	66.3988	59.5285	75.0617	86.5938	303	206	304	101	79	78.2178
gduggal-snapvard	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	59.5348	0.0000	0.0000	2841	1931	0	0	0
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	68.9695	59.5506	81.9277	62.6126	106	72	136	30	29	96.6667
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	68.0618	59.5506	79.4118	68.0751	53	36	54	14	14	100.0000
gduggal-bwaplat	SNP	*	map_l150_m2_e1	het	74.4402	59.5688	99.2072	92.2354	12130	8233	12138	97	27	27.8351
gduggal-bwaplat	INDEL	D1_5	map_l100_m1_e0	hetalt	73.6842	59.5745	96.5517	96.3151	28	19	28	1	1	100.0000
gduggal-bwaplat	INDEL	D6_15	map_l150_m2_e1	het	74.6667	59.5745	100.0000	97.7162	28	19	28	0	0
gduggal-bwaplat	INDEL	I16_PLUS	segdup	*	74.6667	59.5745	100.0000	95.0427	28	19	29	0	0
gduggal-bwafb	INDEL	I16_PLUS	segdup	*	72.7273	59.5745	93.3333	85.9155	28	19	28	2	2	100.0000
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	58.3333	59.5745	57.1429	50.5051	28	19	28	21	12	57.1429
gduggal-bwavard	INDEL	I16_PLUS	HG002compoundhet	het	5.1421	59.5745	2.6870	48.2525	28	19	37	1340	1253	93.5075
rpoplin-dv42	INDEL	I16_PLUS	HG002compoundhet	het	36.6885	59.5745	26.5060	84.0077	28	19	22	61	60	98.3607
gduggal-snapfb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	51.8064	59.5808	45.8266	64.9803	597	405	571	675	121	17.9259
anovak-vg	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	64.3273	59.5954	69.8756	29.2072	1031	699	1067	460	370	80.4348
ckim-isaac	INDEL	D6_15	map_siren	hetalt	74.2364	59.5960	98.4127	73.9669	59	40	62	1	1	100.0000
ndellapenna-hhga	INDEL	D1_5	segdup	hetalt	73.7490	59.6154	96.6667	97.0385	31	21	29	1	1	100.0000
eyeh-varpipe	INDEL	I6_15	HG002compoundhet	het	24.7604	59.6154	15.6250	55.8621	124	84	70	378	375	99.2063
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	74.4454	59.6206	99.0826	87.0083	220	149	216	2	1	50.0000
gduggal-bwaplat	INDEL	I1_5	map_l150_m2_e1	het	74.5562	59.6215	99.4737	96.5316	189	128	189	1	0	0.0000
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	70.5199	59.6244	86.2876	93.0181	508	344	516	82	38	46.3415
gduggal-snapvard	INDEL	D6_15	map_l100_m2_e1	*	65.5947	59.6364	72.8758	83.1683	164	111	223	83	59	71.0843
mlin-fermikit	INDEL	D1_5	map_l125_m2_e1	*	70.7275	59.6370	86.8852	80.8130	690	467	689	104	91	87.5000
mlin-fermikit	INDEL	D1_5	map_l250_m1_e0	homalt	64.7619	59.6491	70.8333	88.7324	34	23	34	14	14	100.0000
ckim-isaac	INDEL	I1_5	map_l250_m2_e1	*	74.7253	59.6491	100.0000	97.1536	68	46	68	0	0
anovak-vg	INDEL	D1_5	map_l250_m1_e0	homalt	73.0707	59.6491	94.2857	96.1957	34	23	33	2	2	100.0000
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	69.6305	59.6491	83.6237	65.9953	238	161	240	47	45	95.7447
jpowers-varprowl	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	69.5297	59.6491	83.3333	65.9574	238	161	240	48	46	95.8333
anovak-vg	INDEL	I1_5	map_l150_m0_e0	*	58.6797	59.6591	57.7320	93.8118	105	71	112	82	51	62.1951
ckim-isaac	INDEL	D1_5	map_l100_m0_e0	homalt	74.7573	59.6899	100.0000	74.1176	154	104	154	0	0

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