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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 715 716 717 718 719 720 721 722 723 ... 1720 1721 » 35901-35950 / 86044 show all
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	39.4599	40.5405	38.4354	56.0538	60	88	113	181	161	88.9503
anovak-vg	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	40.5405	0.0000	0.0000	15	22	0	0	0
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	55.9476	40.5405	90.2439	86.2416	15	22	37	4	4	100.0000
gduggal-bwaplat	INDEL	D1_5	map_l250_m1_e0	het	57.6923	40.5405	100.0000	98.9752	45	66	45	0	0
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	57.6923	40.5405	100.0000	85.4369	15	22	15	0	0
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	38.4337	40.5674	36.5133	81.1880	572	838	865	1504	300	19.9468
anovak-vg	INDEL	I6_15	segdup	*	45.2111	40.5714	51.0490	89.3838	71	104	73	70	55	78.5714
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	42.4079	40.5785	44.4101	31.8353	1417	2075	2014	2521	2293	90.9560
anovak-vg	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	40.5822	0.0000	0.0000	237	347	0	0	0
mlin-fermikit	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	57.6052	40.6053	99.0909	37.5000	322	471	327	3	2	66.6667
ckim-isaac	SNP	tv	map_l150_m0_e0	homalt	57.8158	40.6627	100.0000	71.4889	540	788	540	0	0
gduggal-snapvard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	56.7831	40.6681	94.0520	68.9496	767	1119	759	48	45	93.7500
gduggal-snapfb	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	57.1133	40.6780	95.8333	48.9362	24	35	23	1	1	100.0000
ckim-isaac	INDEL	I6_15	map_l100_m1_e0	het	57.1133	40.6780	95.8333	92.5697	24	35	23	1	1	100.0000
gduggal-snapplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	43.5514	40.6847	46.8526	86.1967	511	745	588	667	17	2.5487
asubramanian-gatk	SNP	ti	map_l100_m2_e0	homalt	57.8604	40.7068	100.0000	78.4309	7453	10856	7453	0	0
gduggal-bwaplat	SNP	*	map_l250_m2_e1	het	57.7898	40.7295	99.4439	97.7262	2144	3120	2146	12	3	25.0000
gduggal-snapvard	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	het	20.9524	40.7407	14.1026	96.9614	11	16	11	67	1	1.4925
jpowers-varprowl	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	24.0700	40.7407	17.0807	46.4226	55	80	55	267	265	99.2509
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	39.6992	40.7407	38.7097	83.7696	11	16	12	19	18	94.7368
gduggal-snapvard	INDEL	I1_5	HG002compoundhet	*	44.4193	40.7689	48.7878	63.5182	5037	7318	5393	5661	4783	84.4904
gduggal-bwaplat	INDEL	I1_5	map_l150_m2_e0	homalt	57.9505	40.7960	100.0000	95.3803	82	119	82	0	0
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	het	55.8252	40.8058	88.3408	90.2407	395	573	394	52	11	21.1538
mlin-fermikit	SNP	ti	map_l100_m0_e0	het	57.7466	40.8496	98.4828	55.5044	5712	8271	5712	88	4	4.5455
ckim-isaac	INDEL	*	map_l250_m2_e0	homalt	58.0247	40.8696	100.0000	94.2543	47	68	47	0	0
mlin-fermikit	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	57.8606	40.8740	99.0058	44.7850	1113	1610	1195	12	11	91.6667
mlin-fermikit	SNP	tv	map_l250_m1_e0	homalt	48.6787	40.8879	60.1375	71.4985	350	506	350	232	216	93.1034
asubramanian-gatk	SNP	ti	map_l100_m2_e1	homalt	58.0606	40.9052	100.0000	78.3356	7565	10929	7565	0	0
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	46.3519	40.9091	53.4653	59.0264	99	143	108	94	71	75.5319
gduggal-snapvard	INDEL	I1_5	map_l100_m1_e0	hetalt	0.0000	40.9091	0.0000	0.0000	18	26	0	0	0
gduggal-snapvard	INDEL	I1_5	map_l100_m2_e0	hetalt	0.0000	40.9091	0.0000	0.0000	18	26	0	0	0
gduggal-snapplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	47.8156	40.9091	57.5278	84.8321	882	1274	982	725	38	5.2414
gduggal-snapplat	INDEL	I1_5	tech_badpromoters	*	47.3684	40.9091	56.2500	86.0870	9	13	9	7	0	0.0000
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	45.0000	40.9091	50.0000	82.1782	9	13	9	9	8	88.8889
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	57.0752	40.9091	94.3662	86.2934	135	195	134	8	3	37.5000
gduggal-bwaplat	INDEL	D6_15	map_l250_m2_e0	*	58.0645	40.9091	100.0000	99.0712	9	13	9	0	0
gduggal-bwaplat	INDEL	D6_15	map_l250_m2_e1	*	58.0645	40.9091	100.0000	99.0891	9	13	9	0	0
gduggal-bwaplat	INDEL	I1_5	map_l150_m1_e0	homalt	58.0645	40.9091	100.0000	94.7641	81	117	81	0	0
gduggal-bwavard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	58.0645	40.9091	100.0000	82.3529	9	13	9	0	0
gduggal-snapvard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	57.3545	40.9277	95.8084	61.2079	300	433	320	14	12	85.7143
asubramanian-gatk	SNP	tv	map_l100_m2_e0	*	58.0625	40.9300	99.8635	87.2733	10246	14787	10244	14	2	14.2857
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	35.9909	40.9326	32.1138	96.9858	158	228	158	334	23	6.8862
mlin-fermikit	SNP	tv	map_l250_m0_e0	homalt	47.1642	40.9326	55.6338	80.3051	79	114	79	63	60	95.2381
mlin-fermikit	INDEL	D1_5	map_l250_m1_e0	*	54.4256	40.9357	81.1765	90.6181	70	101	69	16	14	87.5000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	45.5773	40.9756	51.3433	39.6396	84	121	172	163	161	98.7730
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	45.5773	40.9756	51.3433	39.6396	84	121	172	163	161	98.7730
gduggal-bwavard	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	47.7477	40.9794	57.1942	72.9835	159	229	159	119	85	71.4286
ciseli-custom	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	48.8684	40.9881	60.5000	69.8341	755	1087	726	474	272	57.3840
ciseli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	44.7752	41.0011	49.3146	53.2015	5652	8133	5684	5842	5100	87.2989
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	58.0207	41.0019	99.1935	43.8406	663	954	615	5	5	100.0000

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