PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 341 342 343 344 345 346 347 348 349 ... 1720 1721 » 17201-17250 / 86044 show all
dgrover-gatk	INDEL	I1_5	segdupwithalt	het	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	segdupwithalt	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	segdupwithalt	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	decoy	*	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	decoy	het	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	decoy	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	decoy	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	homalt	0.0000	0.0000	96.0000	0	0	0	1	1	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	map_l125_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	map_l150_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m0_e0	*	0.0000	0.0000	99.2248	0	1	0	1	1	100.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m0_e0	homalt	0.0000		100.0000	0	5	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m0_e0	homalt	0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m1_e0	homalt	0.0000		100.0000	0	4	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m2_e0	homalt	0.0000		100.0000	0	4	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m2_e1	homalt	0.0000		100.0000	0	4	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l150_m0_e0	*	0.0000	0.0000	98.5507	0	7	0	1	0	0.0000
ckim-isaac	INDEL	D16_PLUS	map_l150_m0_e0	het	0.0000	0.0000	98.1818	0	7	0	1	0	0.0000
ckim-isaac	INDEL	D16_PLUS	map_l150_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l150_m0_e0	homalt	0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l150_m1_e0	homalt	0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l150_m2_e0	homalt	0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge