PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
16701-16750 / 86044 show all
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
98.2249
99.6798
0016632
66.6667
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
88.8889
99.7402
012433
100.0000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
84.0909
99.9156
003777
100.0000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5segdupwithalthetalt
0.0000
0.0000
100.0000
99.8771
00100
eyeh-varpipeINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5tech_badpromotershetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.8073
00100
eyeh-varpipeINDELD6_15decoyhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
28.5714
89.5522
00255
100.0000
dgrover-gatkINDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5*homalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5HG002complexvarhomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5HG002compoundhethet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5HG002compoundhethomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5decoy*
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5decoyhet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5decoyhetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5decoyhomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5func_cdshomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
01000
dgrover-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
01000
dgrover-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000