PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
16301-16350 / 86044 show all
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
80.0000
95.7627
003692
22.2222
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
73.0769
94.5493
001971
14.2857
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
83.3333
98.0583
00511
100.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
92.3077
95.2899
001210
0.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
0.0000
0.0000
87.5000
96.2175
002841
25.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
0.0000
0.0000
88.8889
95.1087
001620
0.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
80.0000
97.9339
00411
100.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
88.8889
96.1864
00810
0.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
39.2857
92.8021
0011176
35.2941
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
0.0000
0.0000
80.0000
94.6809
00410
0.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
70.0000
93.8272
00732
66.6667
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
90.2256
000134
30.7692
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
62.7778
95.6793
001136749
73.1343
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
0.0000
0.0000
84.2105
96.6071
003262
33.3333
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
72.1649
94.3008
00702725
92.5926
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
24.4444
96.6518
00113422
64.7059
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
66.0256
95.9130
001035344
83.0189
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
84.8485
96.8116
002852
40.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
71.9101
94.2875
00642524
96.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
32.3529
97.2222
00112318
78.2609
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
65.6652
95.8907
001538052
65.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
79.4118
96.3362
0054143
21.4286
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
72.1154
94.9392
00752927
93.1034
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
39.3443
96.5321
00243722
59.4595
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
69.0773
96.1442
0127712470
56.4516
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
78.3217
96.5283
01112314
12.9032
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
70.6250
95.1427
001134742
89.3617
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
53.0612
96.7191
00524624
52.1739
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
80.0000
94.8570
002566453
82.8125
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
93.6170
95.2929
008863
50.0000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
75.8389
94.4299
001133634
94.4444
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
71.4286
95.0323
00552216
72.7273
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
20.0000
95.5357
00142
50.0000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
100.0000
93.3333
00100
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
97.7778
00010
0.0000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
94.2308
00032
66.6667
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
94.8980
93.3514
009355
100.0000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
93.7008
92.4584
0011987
87.5000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
80.9524
99.7647
001743
75.0000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
75.0000
99.7623
00621
50.0000
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
99.6549
00800
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
60.0000
99.8457
00322
100.0000