PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
16251-16300 / 86044 show all
eyeh-varpipeINDELC16_PLUSmap_sirenhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSmap_sirenhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSmap_sirenhomalt
0.0000
0.0000
95.8333
00010
0.0000
eyeh-varpipeINDELC16_PLUSsegdup*
0.0000
0.0000
100.0000
98.2456
00100
eyeh-varpipeINDELC16_PLUSsegduphet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSsegduphetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSsegduphomalt
0.0000
0.0000
100.0000
96.2963
00100
eyeh-varpipeINDELC16_PLUSsegdupwithalt*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSsegdupwithalthet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUStech_badpromoters*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC1_5*homalt
0.0000
0.0000
92.9054
91.8495
008256338
60.3175
eyeh-varpipeINDELC1_5HG002complexvarhetalt
0.0000
0.0000
88.8235
85.1744
004535754
94.7368
eyeh-varpipeINDELC1_5HG002complexvarhomalt
0.0000
0.0000
93.9636
77.8451
008255338
71.6981
eyeh-varpipeINDELC1_5HG002compoundhethet
0.0000
0.0000
39.2857
93.7639
00111714
82.3529
eyeh-varpipeINDELC1_5HG002compoundhethomalt
0.0000
0.0000
22.4138
90.5537
00134534
75.5556
eyeh-varpipeINDELC1_5decoy*
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5decoyhet
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5decoyhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5decoyhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5func_cds*
0.0000
0.0000
100.0000
95.0000
00100
eyeh-varpipeINDELC1_5func_cdshet
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5func_cdshetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5func_cdshomalt
0.0000
0.0000
100.0000
88.8889
00100
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
40.0000
93.0830
00284214
33.3333
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
54.5455
93.9227
0012102
20.0000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
50.0000
94.5946
0010107
70.0000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
21.4286
90.0000
006225
22.7273
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
82.8070
95.5800
002364946
93.8776
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
84.0816
96.2647
002063928
71.7949
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
69.0773
96.1442
0127712470
56.4516
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
78.3217
96.5283
01112314
12.9032
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
70.6250
95.1427
001134742
89.3617
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
53.0612
96.7191
00524624
52.1739
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
63.6364
94.3590
001482
25.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
53.8462
93.6585
00761
16.6667
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
97.2222
00211
100.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
83.3333
92.2078
00510
0.0000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000