PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
11701-11750 / 86044 show all
gduggal-bwaplatSNPtvsegdupwithalthet
0.0000
100.0000
00000
gduggal-bwaplatSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*decoyhetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardINDEL*func_cdshetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
01252000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
016000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
0125000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
011000
gduggal-bwavardINDEL*map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardINDEL*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardINDEL*tech_badpromotershetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardINDELC16_PLUS**
0.0000
0.0000
32.7485
94.0314
005611511
9.5652
gduggal-bwavardINDELC16_PLUS*het
0.0000
0.0000
27.5862
93.9734
00401058
7.6191
gduggal-bwavardINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC16_PLUS*homalt
0.0000
0.0000
61.5385
94.3355
0016103
30.0000
gduggal-bwavardINDELC16_PLUSHG002complexvar*
0.0000
0.0000
53.4653
87.9042
00544711
23.4043
gduggal-bwavardINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
47.5000
88.2353
0038428
19.0476
gduggal-bwavardINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
76.1905
86.4516
001653
60.0000
gduggal-bwavardINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
20.0000
87.7049
006244
16.6667
gduggal-bwavardINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
20.0000
87.0690
006244
16.6667
gduggal-bwavardINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC16_PLUSHG002compoundhethomalt
0.0000
100.0000
00000
gduggal-bwavardINDELC16_PLUSdecoy*
0.0000
100.0000
00000
gduggal-bwavardINDELC16_PLUSdecoyhet
0.0000
100.0000
00000
gduggal-bwavardINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
gduggal-bwavardINDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
gduggal-bwavardINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000