PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9801-9850 / 86044 show all
eyeh-varpipeSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
99.9907
00010
0.0000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
99.9674
00010
0.0000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
100.0000
94.1176
00100
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNPtvmap_l250_m0_e0hetalt
0.0000
0.0000
66.6667
95.7746
00210
0.0000
eyeh-varpipeSNPtvsegdupwithalt*
0.0000
0.0000
100.0000
99.9988
00100
eyeh-varpipeSNPtvsegdupwithalthet
0.0000
100.0000
00000
eyeh-varpipeSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtvsegdupwithalthomalt
0.0000
0.0000
100.0000
99.9963
00100
eyeh-varpipeSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
96.6292
01033
100.0000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5segdupwithalt*
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5segdupwithalthet
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwafbINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwafbINDELI6_15decoy*
0.0000
100.0000
00000
gduggal-bwafbINDELI6_15decoyhet
0.0000
100.0000
00000
gduggal-bwafbINDELI6_15decoyhetalt
0.0000
100.0000
00000