PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9701-9750 / 86044 show all
eyeh-varpipeSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
90.8257
001000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
62.5000
93.5484
00532
66.6667
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
97.2222
00100
eyeh-varpipeSNP*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
25.0000
99.9765
00130
0.0000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
25.0000
99.9194
00130
0.0000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
40.0000
95.5357
00232
66.6667
eyeh-varpipeSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNP*map_l250_m0_e0hetalt
0.0000
0.0000
85.7143
93.5185
00610
0.0000
eyeh-varpipeSNP*segdupwithalt*
0.0000
0.0000
50.0000
99.9991
00110
0.0000
eyeh-varpipeSNP*segdupwithalthet
0.0000
0.0000
99.9994
00010
0.0000
eyeh-varpipeSNP*segdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*segdupwithalthomalt
0.0000
0.0000
100.0000
99.9987
00100
eyeh-varpipeSNP*tech_badpromotershetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtidecoy*
0.0000
0.0000
100.0000
99.9935
00500
eyeh-varpipeSNPtidecoyhet
0.0000
0.0000
100.0000
99.9962
00200
eyeh-varpipeSNPtidecoyhetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtidecoyhomalt
0.0000
0.0000
100.0000
99.9871
00300
eyeh-varpipeSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
81.2500
93.8697
001332
66.6667
eyeh-varpipeSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
91.2088
00800
eyeh-varpipeSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000