PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9651-9700 / 86044 show all
eyeh-varpipeINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
100.0000
96.7391
00300
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
96.1538
00200
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
85.7143
00100
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
15.0000
57.4468
09231717
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
88.2353
09022
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
083000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
16.6667
30.7692
0031515
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
66.6667
98.7791
021477
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
75.0000
98.7441
00622
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
97.2973
02500
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
37.5000
99.1091
00355
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
15.9091
27.8689
00147465
87.8378
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
27.2727
50.0000
013387
87.5000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
100.0000
85.7143
01100
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
100.0000
75.0000
012100
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
11.1111
18.1818
00187
87.5000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15map_l125_m0_e0hetalt
0.0000
0.0000
100.0000
76.9231
00600
eyeh-varpipeINDELI6_15map_l150_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15map_l250_m0_e0het
0.0000
0.0000
100.0000
96.4912
00200
eyeh-varpipeINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15map_l250_m2_e0hetalt
0.0000
0.0000
100.0000
88.8889
00200
eyeh-varpipeINDELI6_15map_l250_m2_e1hetalt
0.0000
0.0000
100.0000
88.8889
00200
eyeh-varpipeINDELI6_15segdupwithalt*
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15segdupwithalthet
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeSNP*decoy*
0.0000
0.0000
100.0000
99.9950
00600
eyeh-varpipeSNP*decoyhet
0.0000
0.0000
100.0000
99.9964
00300
eyeh-varpipeSNP*decoyhetalt
0.0000
100.0000
00000
eyeh-varpipeSNP*decoyhomalt
0.0000
0.0000
100.0000
99.9917
00300
eyeh-varpipeSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
84.2105
94.1538
001632
66.6667